Pseudoduganella chitinolytica: PX653_09910
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Entry
PX653_09910 CDS
T08857
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
tct
Pseudoduganella chitinolytica
Module
tct_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tct02000
]
PX653_09910
01504 Antimicrobial resistance genes [BR:
tct01504
]
PX653_09910
Transporters [BR:
tct02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PX653_09910
Antimicrobial resistance genes [BR:
tct01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
PX653_09910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
PYNP_C
DUF4429
PASTA
Motif
Other DBs
NCBI-ProteinID:
WEF35054
LinkDB
All DBs
Position
complement(2244780..2245988)
Genome browser
AA seq
402 aa
AA seq
DB search
MKNVKPLTALARPIVAALAVAGLAASLLAGCDDATGKTAEAPAAAGGPPVSAATVVEKTI
AETQEFSGRLEAIDRVEIRSRVSGFITAVNFKPGSQVKKGDVLFVIDPRPYQAEADRAQA
AASSAKAKADLARLELQRAEKLLADKAIAQREFDERASSQKELDANARAAQAQYESAKLN
LAYTRVTAPIEGRVSKAEITLGNLVDASAVLTSVVSLDKIYASFDGDEETYLRVGRQAHR
GEPVVVKVGLANEEGFPHEGKLEFVDNQLDAQTGSVRMRATFANTDGALVPGLFARVQLG
GGTAQAKAILINDRAIGTDQNRKFVFVVGKDNKAEYRPVKLGPTVDGLRVVREGLKADEK
IVVNGLQRVRPGAPITPQLVPMDANVAAKAQDNKKDAKVAAL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtgaaaccattgaccgcactggcacgaccaatagtcgctgcgctggccgtt
gccggccttgccgccagcctgctggccggctgcgacgatgcgaccggcaagacggccgag
gcgccggccgccgccggcggcccacccgtgtccgccgctaccgtggtggagaaaacgatt
gcagaaacgcaggagttctccggccgcctggaagcgatcgaccgtgtcgagatccgctcg
cgtgtgtccggcttcatcacggccgtcaacttcaagccgggcagccaggtgaagaagggc
gacgtgctgttcgtcatcgacccgcgcccttaccaggccgaggccgatcgcgcccaggcc
gccgccagctccgccaaggccaaggccgacctggcccgcctggaactgcagcgcgccgag
aagctgttggccgacaaggccatcgcccagcgcgagttcgacgagcgcgcatcgtcccag
aaggaactggacgccaacgcccgcgccgcccaggcccagtacgaatcggccaagctgaac
ctggcctacacccgcgtcaccgcgccgatcgaaggtcgcgtctccaaggccgagatcacg
ctgggtaacctggtcgacgcgtcggccgtgctgacctccgtcgtctcgctggacaagatc
tacgccagcttcgacggcgacgaggaaacctacctgcgcgtgggccgccaggcgcaccgc
ggcgagccggtcgtcgtcaaggtcggcctcgccaacgaggaaggcttcccgcacgaaggc
aagctcgaattcgtcgacaaccagctggacgcgcagacgggttccgtgcgcatgcgcgcc
acgttcgccaatacggacggcgcgctggtgccgggcctgttcgcccgcgtgcaactgggc
ggcggcacggcgcaggcgaaagcgatcctgatcaacgaccgcgccatcggcacggaccag
aatcgcaagttcgtcttcgtcgtcggcaaggacaacaaggccgagtaccgccccgtcaag
ctgggcccgacggtggacggcctgcgcgtggtgcgcgaaggcctgaaggcggacgagaag
atcgtcgtcaacgggctgcagcgggtgcgcccgggcgcgccgatcacgccgcagctggtg
ccgatggatgcgaacgtcgccgccaaggcgcaggacaacaagaaggacgccaaggtcgcg
gcactgtaa
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