Pseudoduganella chitinolytica: PX653_10210
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Entry
PX653_10210 CDS
T08857
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PX653_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tct03021
]
PX653_10210
Transcription machinery [BR:
tct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PX653_10210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
Phage_terminase
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WEF35110
UniProt:
A0ABY8BH01
LinkDB
All DBs
Position
2307593..2308120
Genome browser
AA seq
175 aa
AA seq
DB search
MTSAISIPRHHAAASPREHFLHSEFRHSYSWLTASMHRLTGSRCDAEDLAASAFTELVAL
DDVSHIRQPRALLTTIARRLTFEFWRRRDLERAHLAELAQRPERHAPSAQDICLGVEEIA
RIDAALHRLGPRVREAFLLSECDELAYADIGARLGVSASMVRKYVAQARTACFTT
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggctatatcgataccgcgacaccacgcggcggcttcgccgcgcgaacacttc
ctgcacagtgagttccgccacagctacagctggctgaccgccagcatgcaccgactgacc
gggtcgcgctgcgacgccgaggacctggccgcgtcggccttcacggaactcgtcgcgctg
gacgacgtcagccacatccgccagccgcgcgcgctgctgacgacgatcgcgcgccgcctg
acattcgaattctggcgccgacgtgacctggagcgcgcccatctcgccgagctggcgcag
cgccccgaacgccacgcaccgtcggcgcaggacatctgcctgggcgtcgaggagatcgcc
cgcatcgacgccgcactgcaccgcctgggtccgcgcgtgcgcgaagcgttcctcctgagc
gagtgcgacgagctggcctacgccgatatcggcgcccgcctgggcgtctccgccagcatg
gtgcgcaagtacgtggcacaagcccgcaccgcctgtttcaccacctga
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