KEGG   Pseudoduganella chitinolytica: PX653_10230
Entry
PX653_10230       CDS       T08857                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
tct  Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:tct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tct03016]
    PX653_10230
Enzymes [BR:tct01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     PX653_10230
Transfer RNA biogenesis [BR:tct03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    PX653_10230
 Prokaryotic type
    PX653_10230
SSDB
Motif
Pfam: Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B Lactamase_B_4
Other DBs
NCBI-ProteinID: WEF35114
UniProt: A0ABY8BGT1
LinkDB
Position
complement(2315144..2316115)
AA seq 323 aa
MELQFLGTSSGIPSKTRNVAGLALRLDGGGWVLVDCGEGTQHRILHTTLSLHALQAICIT
HLHGDHCYGLPGLLASAGMGNRVEPLPLVGPAGLRDYVEGVMATTALRLPFPLQFVDVTQ
LAAAAPLPALDIAAVALSHRVPSWAYRFTERAVERRLDAARLAAAGVPPGPDWGTLQQGG
SVTLADGGVLQGADYLLPARRPRAIVIAGDNDDPGLLLDAVHEADVLVHEATYTQAVLDK
VGAGPQHSSARMVAQFAARAGLRQLVLTHFSPRYLDAARPGMPAIADIEAEARAHYDGTL
FLAADLARYRLDRQGTLTGIDQA
NT seq 972 nt   +upstreamnt  +downstreamnt
atggaacttcaatttctcggcacttcttccggtatccccagcaagacccgcaacgtggcc
ggcctggcgctgcgcctcgacggcggcggctgggtcctggtcgactgcggcgagggcacc
cagcaccgcatcctgcacacgacgctgtcgctgcacgcactgcaggcgatctgcatcacc
cacctgcatggcgaccattgctacggcctgcccggcctcctggccagcgccggcatgggc
aaccgggtcgagccgctgccgctggtcgggcctgccgggctgcgcgactacgtggagggc
gtcatggccacgaccgcgctgcgcctgccgttcccgctgcagttcgtcgatgtcacgcaa
ttggccgcggcggcaccgctgccggcactggacatcgcggcggtggcgctgtcgcaccgc
gtgccctcatgggcctaccgctttaccgagcgcgcggtggaacggcggctcgatgcagcc
cgcctggccgcggccggcgtgccgccggggccggattggggcacgctgcagcagggcggc
agcgtcacgctggcggacgggggcgtgctgcagggtgccgactacctgttgccggcccgg
cgcccgcgcgccatcgtcatcgcgggcgacaacgacgatcccggcctcctgctggacgcg
gtgcacgaagccgacgtgctggtacacgaagccacctatacgcaggcggtgctggacaag
gtgggcgccggcccgcagcacagttccgcgcgcatggtggcgcaatttgccgcccgcgcg
ggcctgcgccaactggtgctgacgcatttcagcccgcgttacctggacgccgcgcgcccc
ggcatgccggccatcgccgatatcgaggcggaggcgcgcgcccactacgacggcacgctg
ttcctggcggcagacctggcgcgctaccggctggaccggcagggcacgctcaccggcatc
gatcaggcataa

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