Pseudoduganella chitinolytica: PX653_12070
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Entry
PX653_12070 CDS
T08857
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PX653_12070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tct03000
]
PX653_12070
03400 DNA repair and recombination proteins [BR:
tct03400
]
PX653_12070
Enzymes [BR:
tct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PX653_12070
Transcription factors [BR:
tct03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PX653_12070
DNA repair and recombination proteins [BR:
tct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PX653_12070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WEF35449
LinkDB
All DBs
Position
2721567..2722955
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AA seq
462 aa
AA seq
DB search
MDLTDRFSCHRAVQARDARFDGRFFVGVTSTGIYCRPICPARTPKLENCRFYPSAAAAQQ
SGFRPCLRCRPESAPGGGAWRGSSDTVARALALLGESGQHDEPALAAVAARLDVSMRQLR
RLFQQHLGASPVAVLQTRRILVAKQLIHETRLPMTAVAMAAGFGSIRRFNETFQAMYGRP
PSALRGRSAGQADSAAEIVLRLRYRPPYDWPALLAQCPVLPGIANVAGAEYRRAVRIGTA
SGTVRVWHEPARHNLHVGLRLDDIRMLADTLARVARACDTAADIAAIDAHLAADPLLAPP
IAARPGLRVAGPWDPFEAAVLALLPPGALPALLARCAEALAPALQLPGVTHLFPAPAAVA
AAGLADLPAAPQLLQALQALAHAMARDATFLQPGSAPVGARLATLAGFDAPLAARVATAV
AGEGDAFCCADPALLARSSAWQPWRAYAARHLSLTEETPCAV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacctcactgaccgcttcagctgccaccgggccgtgcaggcgcgcgacgcgcgcttc
gacggccgcttcttcgtcggcgtcacgtcgacgggcatctactgccgccccatctgtccg
gcgcgcacgccgaagctcgagaactgccgtttctacccgtccgccgccgccgcgcagcag
tcgggcttccggccgtgcctgcgctgccgccccgaatccgcgcccggtggcggcgcctgg
cgcggcagttccgacacggtcgcgcgtgccctggcgctgctgggcgaatccggccagcac
gacgagccggcgctggccgccgtcgcggcacggctggacgtcagcatgcgccagctgcgc
cgcctgttccagcagcacctgggggcctccccggtcgccgtattgcagacgcgccgcatc
ctggtcgccaagcagctgatccacgaaacccggctgcccatgacggcggtggcaatggcg
gccggcttcggcagcatccgccgcttcaacgagacgttccaggccatgtatggccggccg
cccagcgcgctgcgcggccgcagcgcgggccaggccgacagcgccgccgagatcgtgctg
cgcctgcgctaccggccgccatacgactggcccgccctgctggcgcaatgtcccgtcctg
cccggtatcgccaacgtcgcgggcgccgaataccgccgcgccgtgcgcatcggcacggcc
agcggcaccgtgcgcgtgtggcacgaaccggcgcggcacaacctccacgtgggactgcgg
ctggacgacatccgcatgctggccgacaccctcgcgcgcgtggcccgtgcctgcgatacc
gcggccgacatcgcagccatcgacgcccacctggcggccgatccgctgctcgcgccgccc
atcgccgccaggccgggcttgcgggtggccggcccctgggaccctttcgaagccgccgtg
ctggcactgctgccgcccggcgccctacccgccctgctggcacgctgcgccgaagcgctg
gcgccggcgctgcagctgccgggcgtgacgcacctgttccccgcgccggccgccgtcgcc
gctgccggcctggcggacctgccggcggcaccgcaacttctccaggcgctgcaggcgctg
gcgcatgcgatggcgcgcgacgcgacgttcctgcagccgggcagcgcgcccgtcggcgcg
cgcctcgcaacactggccggcttcgacgcaccgctggctgcccgcgtggccacggcagtc
gcgggcgagggcgacgcgttctgctgcgccgaccccgcgctgctggcccgcagcagcgcc
tggcaaccctggcgcgcctatgccgcgcgccacctttcattgaccgaggagactccatgc
gcagtatag
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