Pseudoduganella chitinolytica: PX653_15050
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Entry
PX653_15050 CDS
T08857
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tct
Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tct03032
]
PX653_15050
03036 Chromosome and associated proteins [BR:
tct03036
]
PX653_15050
03400 DNA repair and recombination proteins [BR:
tct03400
]
PX653_15050
DNA replication proteins [BR:
tct03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PX653_15050
Chromosome and associated proteins [BR:
tct03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PX653_15050
DNA repair and recombination proteins [BR:
tct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PX653_15050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2530
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WEF30792
LinkDB
All DBs
Position
3419797..3420084
Genome browser
AA seq
95 aa
AA seq
DB search
MKKGELIAEFAKRTEMSGAAANDAVNTLIAIVTERLKKGDTVGITGFGTFSVAKRAARKG
RNPATGEAIKIAASKTPKFSAGATLKAAVNPTKKK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgaactgattgcagaatttgcgaaacgtaccgaaatgtccggtgccgcc
gccaacgacgcagtgaacaccctgattgccatcgttaccgaacgtctgaaaaaaggcgac
acggtcggcatcaccgggttcggcacgttctccgtcgccaagcgtgccgctcgcaaaggc
cgcaatcccgcaaccggtgaagcgatcaagatcgcggcatcgaagacgccgaagttctcg
gctggcgccacgctgaaggccgccgtcaacccgaccaagaagaagtaa
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