Pseudoduganella chitinolytica: PX653_15935
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Entry
PX653_15935 CDS
T08857
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tct
Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tct03021
]
PX653_15935 (rpoH)
Transcription machinery [BR:
tct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PX653_15935 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WEF35942
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Position
3624364..3625254
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AA seq
296 aa
AA seq
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MSAPTALVPAGTSALGLGFSGNLGNLDAYISAVNRLPMLTHDEEVQLGRRLKDNNDLKAA
EKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWIK
AEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKQGLDAMTPGQIDQLAKMLDVKREEVIE
METRLSGRDIALESPTDDEDDKFAPIAYLSSDQNEPTKVLEAEQVTRLQSEGLETALSKL
DPRSRRIVEARWLANDDGSGATLHTLADEFGVSAERIRQIESAALKKMKGALAAYV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctaccgccctggttccagccggcacgagtgctttgggcctcgggttttct
ggcaacctgggtaacctggatgcctacatttccgccgtgaatcgcctgccaatgctgacg
cacgacgaagaagtccagctgggtcggcgcctgaaggacaacaacgacctgaaggccgcc
gaaaagctcgtgctgtcgcacctgcgcctggtggtttcgatcgcccgcggctacctgggc
tacggcctgccgcacgccgacctgatccaggaaggcaatatcggcctgatgaaggcagtc
aagcgcttcgacccggaccagggcgtccgcctcgtgtcgtatgcaatgcactggatcaag
gccgagatgcatgagtacatcctgaaaaactggcgcctcgtgaaggtggcgacgaccaag
gcgcaacgcaagctgtttttcaacctgcgcagccacaagcagggcctggacgccatgacg
ccgggccagatcgaccagcttgccaagatgctggacgtcaagcgcgaggaagtgatcgag
atggaaacccgcctgtccggccgcgacatcgcgctggaatcgccgacggatgacgaggac
gacaagttcgccccgatcgcctacctgtcgtcggaccagaacgagccgaccaaggtgctg
gaagcggaacaggtcacgcgcctgcagtccgagggcctggaaacggcgctgtcgaagctg
gacccgcgctcgcgccgcatcgtggaagcgcgctggctggccaacgacgacggctccggc
gccacgttgcacacgctggccgacgagttcggcgtctccgccgagcgcatccgccagatc
gaatcggccgcgctgaagaagatgaagggcgcgctggccgcctacgtgtaa
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