Pseudoduganella chitinolytica: PX653_17440
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Entry
PX653_17440 CDS
T08857
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct02024
Quorum sensing
tct03060
Protein export
tct03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PX653_17440 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PX653_17440 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PX653_17440 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tct02044
]
PX653_17440 (ffh)
Enzymes [BR:
tct01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PX653_17440 (ffh)
Secretion system [BR:
tct02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PX653_17440 (ffh)
Eukaryotic Sec-SRP protein
PX653_17440 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_31
AAA_22
AAA_16
AAA_30
T2SSE
YqeC
GTP_EFTU
KTI12
AAA_33
AAA_14
nSTAND3
ArsA_ATPase
ParA
AAA_19
ATP_bind_1
Rad17
AAA
APS_kinase
ResIII
6PF2K
NTPase_1
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
WEF31240
LinkDB
All DBs
Position
3942412..3943779
Genome browser
AA seq
455 aa
AA seq
DB search
MLDNLTQRLAKVVKTMRGEARLTEANTAEMLREVRLALLEADVALPAVREFIGKVKEKAL
GEEVISSLTPGQALVGVVQRELGALMGADLGPEAAQLSFAQQPPAIILMAGLQGVGKTTT
VGKLAKYLREEKKKKVLTVSADVYRPAAIAQLQSVTGQAGADFFPSSASDKPVDIALAAL
DWAKKHYHDVLIVDTAGRLGIDEEMMKEIAAVHGAVKPVETLFVVDAMLGQDAINTAKAF
NDALPLTGIVLTKLDGDSRGGAALSVRHITGKPIKFAGVSEKLDGLEPFDPSRMANRILG
MGDILALVEEARKGVDQKAAADLAAKVKSGGKFDMNDFKAQLGQMKKMGGMASLVDKLPA
QFQQAAGGANMDQADKQVRRMVGIIDSMTPAERAKPELIKAARKRRIAAGAGVQVQEVNR
MLNQFEQMQTMMKKLSGGGMMKMMRSMKGMMPGLR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaatctgactcaacgcctcgccaaggtcgtcaagaccatgcgcggcgaggcc
cgcctgaccgaggccaataccgccgagatgctgcgcgaagtgcgcctggcactgctggag
gccgacgtggccctgccggccgtgcgcgaattcatcggcaaggtcaaggaaaaggccctg
ggcgaggaagtgatctcgtcgctgacgccgggccaggcgctggtcggcgtcgtccagcgc
gaactgggtgccctgatgggcgccgacctgggcccggaagcggcccagttgagctttgcg
cagcagccgcccgcgatcatcctgatggccggcctgcagggtgtcggtaaaacgaccacc
gtcggcaagctggccaagtacctgcgcgaagagaagaagaaaaaagtgctgaccgtgtcg
gccgacgtgtaccgccccgccgcgatcgcgcagctgcagtccgttacgggccaggccggt
gccgacttcttcccgtcctcggcctccgacaagccggtcgacatcgcgctggcggcgctg
gactgggccaagaagcactaccatgacgtgctgatcgtcgacacggccggccgcctcggt
atcgacgaggagatgatgaaggagatcgccgccgtgcacggcgcggtcaagcccgtcgag
acgctgttcgtcgtcgacgcgatgctgggccaggatgcgatcaacactgccaaggccttc
aacgatgcgctgccgctgaccggcatcgtgctgaccaagctcgatggcgactcgcgcggt
ggcgcggcgctgtcggtgcgccacatcacgggcaagccgatcaagttcgccggcgtctcc
gagaagctcgatggcctggagccgttcgatccgtcccgcatggccaaccgcatcctgggc
atgggcgacatcctcgcgctggtcgaggaagcacgcaagggcgtcgaccagaaggccgcg
gccgacctggcggccaaggtcaagtcgggcggcaagttcgacatgaacgacttcaaggca
caactgggccagatgaagaagatgggcggcatggcgagcctggtcgacaagctgccggcc
cagttccagcaggccgccggcggcgccaacatggaccaggccgacaagcaggtgcgccgc
atggtcggcatcatcgactcgatgacgccggccgaacgggccaagccggaattgatcaag
gccgcgcgcaagcgccgcatcgccgccggtgccggcgtgcaggtgcaggaagtcaatcgc
atgctcaatcagttcgagcagatgcagacgatgatgaaaaagctgtcgggcggcggcatg
atgaagatgatgcgctcgatgaaaggcatgatgccgggactgcgttga
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