Pseudoduganella chitinolytica: PX653_19375
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Entry
PX653_19375 CDS
T08857
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tct
Pseudoduganella chitinolytica
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tct03009
]
PX653_19375
Ribosome biogenesis [BR:
tct03009
]
Prokaryotic type
ribosomal protein modification factors
PX653_19375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TauE
Motif
Other DBs
NCBI-ProteinID:
WEF31604
LinkDB
All DBs
Position
complement(4370749..4372365)
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AA seq
538 aa
AA seq
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MSDLAQLASFTRRAAGTRAVGVLATPATLALLPAADAQERARLAAFAGEFAAFPAFHRKW
RWNAMLQAQLAALLARLATQEPEPGCVYLYLRGAFTKRYFPAPRTAALPPSEGRGCRAGT
ADIDGALRAFGNASAQALVLQASPAGDHHHCYQPATGLLGIGRGGTDRQRMRGAVLEYCE
RWAASIVPPGACRARHVDLGTAAWRPDQVMAVPPAQAATLFPGFDPRRPMHWLPCRLVHA
DTQRWLPLQMINYLLQPDQAFSHCQNSNGCALGSSAMEAALFGALELIERDALLLAWYSR
STPPRFVAASIDSAPLRQLHALLELAGYTVCCFDITTEFALPAVLVLLLGRGDERLGAFV
TAACHPDPHEAMAAALGEAHSLAGITEHNLARQRQRHGDGHLEHLRDSAQAQYYGQHGQR
RHFDFLANATPTLAWRDFTATHAASAQAALRGPAAAWDMLCERALQAGFEPVVADVTPPG
LCALGLHAARVFMPGTLPLTFGDRPLCLPPGRLARAARHCPWVDANADLSHPLLHPLG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctggcccaattggcgagtttcacgcggcgcgcggcgggaacacgtgccgtc
ggcgtgctggcgacgccggcaacgctggcgctgctgccagccgccgatgcgcaagagcgt
gcgcggctcgccgcattcgccggcgaatttgccgccttccccgcgttccatcgaaagtgg
cgctggaacgccatgctgcaggcgcaactggcagcgttgctggcgcgcctggccacccag
gagccggaaccgggttgcgtttatctgtacttgcgaggtgctttcaccaagcggtatttc
ccggcgccgcgcacagctgcgctgccgccatcggaggggcgcggctgccgggccgggacg
gcggatatcgatggcgccttgcgcgccttcggcaacgcctcggcgcaggcactcgtgctg
caggccagccccgccggcgaccatcaccattgctaccagccggcgactggcttgctgggg
atcggccgcggcggcacggaccggcagcgcatgcgcggcgccgtgctggaatattgcgaa
cgctgggccgccagcatcgtgccgccgggagcgtgccgcgcccgccacgtggacctgggc
accgcagcctggcggccggaccaggtgatggcggtgccgccggcgcaggcagcgaccttg
ttccccggcttcgacccgcgccggcccatgcactggctgccctgccgcctggtgcacgcg
gacacgcagcgctggctgcccctgcagatgatcaactacctgctgcagccggaccaggcc
ttcagccactgccagaacagcaacggctgcgcgctgggcagttcggccatggaagccgcg
ctgttcggggcactggaattgatcgagcgcgatgcgctgctgctggcgtggtacagccgt
tccacgccgccccgcttcgtcgccgccagcatcgacagcgcgccgctgcgccaattgcac
gcgctgctggaactggcgggttacacggtgtgctgtttcgacatcacgacggagttcgcg
ctgccggccgtgctggtgctgttgctgggccggggcgacgagcgcctgggcgccttcgtc
acggcggcctgccaccccgatccgcacgaggccatggccgcggcgctgggcgaggcccat
tcgctggccggcatcacggagcacaacctggcacggcagcggcaacggcatggcgacggc
cacctggaacatctgcgcgacagcgcccaggcacagtactacggccagcatggccagcgc
cgtcatttcgatttcctcgccaacgccacgccgacgctggcgtggcgggacttcacggcc
acgcacgccgccagcgcccaggcggccctgcgcggtccggccgccgcctgggacatgctg
tgcgagcgcgccttgcaggcgggctttgaaccggtcgtggcggacgtcacgccacccggc
ttgtgcgcgcttggcctgcatgccgcccgtgtcttcatgccgggcaccttgccgctgacg
ttcggcgaccggcccctgtgcctgccgcccggacggctggcccgcgccgcgcggcattgc
ccatgggtcgacgcgaacgccgacctgtcccatcccttactgcatccgctgggctga
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