Pseudoduganella chitinolytica: PX653_20535
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Entry
PX653_20535 CDS
T08857
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct00300
Lysine biosynthesis
tct00470
D-Amino acid metabolism
tct01100
Metabolic pathways
tct01110
Biosynthesis of secondary metabolites
tct01120
Microbial metabolism in diverse environments
tct01230
Biosynthesis of amino acids
Module
tct_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PX653_20535
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PX653_20535
Enzymes [BR:
tct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PX653_20535
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WEF31800
UniProt:
A0ABY8B788
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All DBs
Position
complement(4633089..4634336)
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AA seq
415 aa
AA seq
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MNAPAPKLPPQHAPLKQFAVEGDCLLVGGVPLTRLAQRVGQTPFYAYDRAAITARVAELR
AALPADVHLHYAMKANPMPAVVQHLATLVDGIDVASGGELRVALDTPMAPGHVSFAGPGK
SDADLSCAIAAGIVLNLESEGEMERAAAVGQRLGIAPQVNVRVNPDFELKSSGMKMGGGP
KQFGVDAERVPAMLRRIGALELDFHGFHIFSGSQNLKVAALQEAHEKTFALALRLAADAP
RPPRILNIGGGFGIPYFPGEERLDLPAVGANLARILDEVRPQLQGAQVVIELGRYLVGEA
GVYVCRVVDRKESRGHVYLVTDGGLHHHLSASGNFGQVIRKNYPVVIGNRVQGGAREKAS
VVGPLCTPLDLLADQMELARAEPGDLVAVLQSGAYGMTASPAGFLSHPAALEILV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgccagccccgaagctgccgccgcagcacgcgccgctgaagcagttcgcggtg
gagggcgactgcctgctggtgggcggcgtgccgctgacgcgcctggcccagcgggtgggg
cagacgccgttctatgcctacgaccgcgccgccatcacggcccgcgtggccgagctgcgc
gccgcgctgccggccgacgtgcacctgcattacgcgatgaaggccaacccgatgccggcc
gtcgtgcagcacctggcgaccttggtggacggtatcgacgtggcctccggcggcgaactg
cgcgtggcgctggacaccccgatggcgcccggccatgtcagctttgcagggccgggcaag
agcgacgcggacctgtcctgcgcgattgccgccggcatcgtgctgaacctggaatcggaa
ggcgagatggagcgcgccgccgccgtcggccagcgcctgggcatcgcgccgcaggtcaac
gtgcgcgtcaatccggatttcgaattgaagtcgtccggcatgaagatgggcggcgggccc
aagcagttcggcgtcgatgccgagcgtgtccccgccatgctgcgccggatcggcgcgctg
gagctggacttccacggcttccatatcttcagcgggtcgcagaacttgaaagtggcggcg
ctgcaggaagcccatgagaagacgtttgcgctggcgctgcgcctggcggctgacgccccc
cggccgccgcgcatcctcaatatcggcggcggcttcggcattccgtacttccccggcgag
gaacggctggacctgccggccgtgggcgccaacctggcccgcatcctggacgaagtgcgc
ccgcaactgcagggcgcccaggtcgtcatcgagctggggcgctacctggtgggcgaggcc
ggcgtgtacgtctgccgcgtggtggaccgcaaggagtcgcgcggtcacgtctacctggtc
acggacggcgggctgcaccatcacctgtccgcctccggcaatttcggccaggtgatccgc
aagaattaccccgtcgtgatcggcaaccgcgtgcagggcggcgcgcgcgagaaggcctcc
gtcgtgggaccgctgtgcaccccgctggacctgctggccgaccagatggagctcgccagg
gccgagccgggcgacctggtcgcggtgctgcagtccggcgcctacggcatgacagccagt
ccggccggcttcctcagccatccggcggcgctggaaatactggtgtga
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