Pseudoduganella chitinolytica: PX653_22990
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Entry
PX653_22990 CDS
T08857
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct02010
ABC transporters
tct03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PX653_22990
03070 Bacterial secretion system
PX653_22990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tct02000
]
PX653_22990
02044 Secretion system [BR:
tct02044
]
PX653_22990
Transporters [BR:
tct02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PX653_22990
Secretion system [BR:
tct02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PX653_22990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_21
AAA_16
AAA_22
CECR6_TMEM121
SbcC_Walker_B
Zeta_toxin
AAA_30
CRPA
NB-ARC
AAA_29
MobB
Motif
Other DBs
NCBI-ProteinID:
WEF32254
LinkDB
All DBs
Position
5154562..5156670
Genome browser
AA seq
702 aa
AA seq
DB search
MQCLTAVAQHHGVQINPERLIEQYALGAEEPADGLLLRMANEIGLKAKVSKLGWLGLLGQ
QGVYPLLARLRDGNTVIVVGARAETGHVAVLDPREGPQVAMLDEATFMARWTGHVVFVKR
EHKLSDPDQPFGLRWFIPEILKQKAAFRDIFIAAVAMQILALGSPIFFQLVIDRVLTHQA
VTTLWVLAAGITIALVFDALFGFLRQMLTLAASNKIDIRLTRRTFSHLLSLPIDYFETTT
AGVITRHMQQVEKIRSFLTGRLFFTGLDLISLVVFLPILFSYSFRLTLIVLLFTLVIAGI
VMAMVPTFQRRLNALYTAEGNRQAMLVETIHGMRTVKALAIEPNQRRNWDQRSAESITMH
YRVGQISITGNSVTDFLGKLMPVAIIVVGAQQVFDQTLTVGALIAFQMLSQRVTQPLIAI
VGLVNEYQETALSVKMMGEVMNRAPEGRAGAGGLRPILQGEIRFEDVNFRYPGAPNLALD
RTAFTIRPGTVVGVVGRSGSGKTTLTKVIQGLYAVQDGIVRFDGIDAREIELSHLRRQIG
VVLQENFLFRGTVRDNLVITKPDATHEEIAEAAAAAGADEFIERLPQGYDTLLEENASNL
SGGQKQRLSIARSLLAKPRILILDEAASALDPESEAIFIRNLSKIAVGRTVIMISHRLST
LVNADSILVMQRGRLVDAGRHEELLTRSDTYQHLWNQQTSHL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatgcctgaccgccgtcgcacaacatcacggcgtgcagatcaaccccgaacgactg
atcgagcagtacgcgctgggcgcggaagagcccgccgatggcctgctgctgcgcatggcc
aacgagatcggcctgaaggccaaggtaagcaagctgggctggctgggcctcctcggccag
caaggcgtctatccgctgctggcgcggctgcgcgatggcaataccgtcatcgtggtcggc
gcgcgggcggaaacgggccacgtcgccgtgctcgatccgcgcgaagggccgcaggtggcc
atgctggacgaggccacgttcatggcccgctggaccggccatgtcgtgttcgtcaagcgc
gaacacaagctgtccgatccggaccagccgttcggcctgcgctggttcatcccggagatc
ctgaaacagaaagcggcattccgcgacatcttcatcgctgccgtcgccatgcagatcctg
gcgctgggttcgccgatcttcttccagctcgtgatcgaccgcgtgctcacgcaccaggcc
gtcaccacgttgtgggtgctggccgccggcatcacgatcgccctcgtgttcgatgcgctg
ttcggcttcctgcgccagatgctgaccctcgccgcgtcgaacaagatcgacatccgcctg
acccggcgcacgttcagccacctgctgtcgttgccgatcgattatttcgagaccacgacg
gccggtgtcatcacgcgccacatgcagcaggtcgagaagatccgcagcttcctgacgggc
cggctgttcttcacgggcctggacctgatctcgctggtcgtgttcctgcccatcctgttc
tcctattcgttccgcctgaccttgatcgtgctgttgttcacgctggtgatcgcgggcatc
gtgatggcgatggtgcccacgttccagcgccgcctgaacgcgctgtacacggccgaaggc
aaccgccaggccatgctggtcgaaaccatccacggcatgcgcaccgtgaaggccctggcc
atcgaaccgaaccagcgccgcaactgggaccagcgctcggccgaatcgatcacgatgcac
taccgcgtcggccagatctccatcaccggcaactcggtcacggacttcctcggcaagctg
atgccggtggcgatcatcgtcgtcggcgcgcagcaggtgttcgaccagaccttgaccgtc
ggcgcgctgatcgcgttccagatgctgtcgcaacgcgtcacgcagccgctgatcgccatc
gtcggcctcgtcaacgagtaccaggagacggcgctgtcggtgaagatgatgggcgaggtg
atgaaccgcgcccccgagggccgtgccggcgccggcggcctgcgtcccatcctgcagggc
gagatccgcttcgaggacgtcaacttccgctatccgggcgcgccgaacctggcgctggac
cgcaccgcgttcacgatccgtcccggcaccgtggtgggcgtcgtgggccgcagcggctcc
ggcaagaccacgctgacgaaggtgatccagggcctgtatgccgtgcaggacgggatcgtc
cgcttcgacggcatcgatgcgcgcgagatcgagctgtcgcacctgcggcgccagatcggc
gtcgtgttgcaggagaacttcctgttccgcggcaccgtgcgcgacaacctcgtcatcacc
aagcccgacgccacccacgaggagatcgccgaggcggccgccgcggcgggcgccgacgaa
ttcatcgagcgcctgccgcaaggctacgacacgctgctggaagagaacgcgtcgaacctg
tccggcggccagaagcagcgcctgtcgatcgcccgctcgctgctggccaagccgcgcatc
ctgatcctggacgaagcggccagcgcgctcgaccccgaaagcgaagcgatcttcatccgc
aacctgtcgaagatcgccgtgggacgtaccgtcatcatgatctcgcaccggctgtccacc
ctggtcaatgccgactcgatcctcgtgatgcagcgcggacgcctcgtcgatgcgggccgc
cacgaagagctcctcacccgtagcgatacttaccagcatttatggaaccagcaaacaagc
cacctgtaa
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