KEGG   Pseudoduganella chitinolytica: PX653_23155
Entry
PX653_23155       CDS       T08857                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
tct  Pseudoduganella chitinolytica
Pathway
tct03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PX653_23155
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tct02044]
    PX653_23155
Secretion system [BR:tct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PX653_23155
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Phage_Mu_Gp45 Gp5_trimer_C
Other DBs
NCBI-ProteinID: WEF32285
UniProt: A0ABY8B8Q0
LinkDB
Position
5191422..5193581
AA seq 719 aa
MATQFRLEVDPTVGQAGYPQREFTMQHNESDAAFVRRLLKRRGINWHFEPVPSDDYVAHR
MVLWNHADSCRPNAAGTVRYHRDAATEERDSITSWHAVRTLQPGSVTRHSWNYAEPYASG
LMSVTTESHVKNSFSGISATLNDYQVLMPHAGDSHDDLVALGTLAMQRHDYETKCFQGEG
SARAFRAGEYFRLAGHAEIDRHPPEEREFVITALRIAADNNLPKALAERVEAIFSRSGWL
TGELASSRDHGSRSRIGFTAVRRGTDIVPAFDARTDLPVVHTQSAVVVGPDGEDVHCDEQ
GRVKVRFPGTREEDHAHAYGGSGASDTERDSAWIRVATNWAGEGPAPGIQCGTVSLPRVG
SEVLIAFLGGDPDKPVIVGQLYNGKGHPPALSASGALPGNRYLSGMRSKEVRQGGRGNQL
RFDDTAGQISAQLASDHAQSQLNLGYLTQPRRAGFGEERGQGAELRSQKSVAVRGIEGVL
VTAESSDCNAGRHVERGELLRIAEGLEKLAKELAMRAADHAGDKPDSGALAQLFGALKAL
EQQATPLVAVSGPAGIVAGSGANLALGAVTDIDMVSAQATRIAAGETATIRAAQGLSFFA
NEGGARLTAAAGKVAIHAQEEQLELLAKKVLEIISTTDWITIKAKKGVRINGGGTELELS
AAGIKGYTSGKHHMYAADHQTFPGQQKTLQFPGDKPVHKICVPCLLIAAQAHSPFAPSK
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggcgacgcagtttcggctggaagtcgatccgacggtcggccaggccggctacccgcag
cgcgaattcacgatgcagcacaacgagtcggatgcggccttcgtccgccgattgctcaag
cgccgggggatcaactggcacttcgagcccgtgccgtccgacgactatgtcgcgcaccgc
atggtgctgtggaaccacgccgacagctgccgtcccaacgcggccggcacggtgcgttac
caccgcgatgccgccaccgaggagcgcgacagcatcaccagctggcatgccgtgcggacg
ctgcagccgggcagcgtcacgcgccacagctggaactacgcggagccgtacgcgtcgggc
ctgatgagcgtgacgacggaaagccacgtcaagaattcgttctcgggcatcagcgcaacg
ctgaacgactaccaggtcctgatgcctcacgcaggagacagtcacgacgacctggtcgcc
ctgggtacgctggcgatgcagcgccacgattacgagaccaagtgttttcagggagagggc
agcgcgcgcgccttccgtgcgggcgaatatttcaggctggccggtcacgccgaaatcgac
cggcacccgcccgaggaacgggagttcgtcatcacggcactgcggatcgcggccgacaat
aatttgccgaaagcgctggccgagcgcgtcgaggcgatcttctcgcgcagcggctggctg
acgggcgaactcgcctcttcccgggaccacggcagccgctcgcgaatcggcttcacggcg
gtccgccggggcacggacatcgtgccggccttcgacgcccgcaccgatctgccggtggtg
cacacgcagagtgccgtcgtcgtcggacccgatggcgaagacgtccattgcgacgagcaa
ggccgggtcaaggtgcgctttccgggcacgcgcgaggaggaccacgcgcatgcctacggc
ggcagcggcgcctccgacaccgaacgcgactccgcctggattcgcgtcgccaccaactgg
gctggcgaggggcccgcacccggcatccaatgcggcaccgtcagcctgccgcgcgtgggc
tcggaggtgctgatcgcgttcctcgggggcgacccggacaagcccgtgatcgtgggccag
ctgtacaacggcaagggccacccgcccgcgctcagtgccagcggcgcgctgccgggcaac
cgttacctgtccggcatgcgctcgaaggaggtgaggcagggcggtcgcggcaaccagctg
cgcttcgacgacactgcgggtcagatcagtgcccagctggccagcgatcacgcgcaatcg
cagctgaacctgggctacctgacgcagccccgtcgcgccggctttggcgaggaacgcggc
cagggcgccgaattacgcagccagaaaagcgtcgcggtgcgcggcatcgagggcgtgctg
gtgacggccgaaagcagcgactgcaatgcgggccgtcatgtagagcgcggggagctgttg
cgcatcgccgagggcctggagaaactggcgaaggagctggcgatgcgtgcggccgaccac
gccggcgacaagccggacagcggcgccctcgcacagctgttcggtgccctcaaggcgctg
gaacagcaagccacgccactggtggcagtcagcgggccggcggggatcgtcgccggcagc
ggggccaatctggcgctgggcgccgtgacggacatcgacatggtcagcgcacaagccacg
cgcatcgcggccggcgagacggccacgattcgtgccgcgcagggcctgagcttctttgcc
aacgaaggcggtgccaggctgaccgcggcggccggcaaggtcgctatccatgcccaggag
gagcaacttgaactgctagcgaagaaggtcctggaaatcatcagcacgacggactggatc
acgatcaaggccaagaagggcgtgcgcatcaatggcggcggcaccgagctggaattgagc
gcggccggtatcaagggctacacgtccggcaagcaccatatgtacgcggcggaccaccag
accttccccggccagcagaaaacgctgcaattccccggcgataagccagtccacaagatc
tgcgtgccgtgtctgctgatcgcagcacaagcccatagtcctttcgcgccgtccaaatga

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