Thermomonospora curvata: Tcur_2027
Help
Entry
Tcur_2027 CDS
T01127
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tcu
Thermomonospora curvata
Brite
KEGG Orthology (KO) [BR:
tcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcu03016
]
Tcur_2027
Enzymes [BR:
tcu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Tcur_2027
Transfer RNA biogenesis [BR:
tcu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Tcur_2027
Prokaryotic type
tRNA splicing ligases
Tcur_2027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
SoPB_HTH
Motif
Other DBs
NCBI-ProteinID:
ACY97594
UniProt:
D1AEL9
LinkDB
All DBs
Position
complement(2389407..2390834)
Genome browser
AA seq
475 aa
AA seq
DB search
MGMRIVRESPYRVRIEREGDMRVPGVVFASRALLPDPVTDRSLLQVVNVATLPGIVVASF
AMPDVHWGYGFPIGGVAATDVDAGGVVSPGGVGFDISCGVRLLAAGLERAELSGRVLQKL
MDELGRAVPRGLGRRAVWPLAGRAQLERVLAGGSRYAVEQGYGTPRDLERCEDGGAVGGA
DAAAVSARAMERGLGQLGSLGSGNHFLEVQAVSEVHDEIAAKAFGLGPGQICVMIHSGSR
GLGHQICTDHVRAMEKAMRRHSISVPDRQLACAPAGSPEGRAYLAAMAAAANYGRANRQL
LTEAARRAFRGVCGTDLELVYDVSHNLAKIETHRVDGTARRLCVHRKGATLALPPRHPDL
PEDLADVGQPVLIPGSMGTASYVLAGVAANPAFNSTCHGAGRLHSRHQAAKAVSGRELRD
RLEGAGIAVRGASWRGLAEETPEAYKDVDAVVAAAEGAGLCRTVARLVPLGVVKG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcggatcgtccgggagagtccataccgggtgcggatcgagcgggaaggggac
atgcgcgtgccgggggtggtgttcgcctcccgcgcgctgctgccggatccggtcaccgac
cggtctctgctgcaggtcgtcaacgtggcgacgctgcccggcatcgtggtcgcctcgttt
gcgatgccggacgtgcactgggggtacgggttcccgatcgggggcgtggcggccaccgac
gtcgacgccggaggcgtggtgtcgccggggggcgtcggtttcgacatctcctgcggggtg
cggctgctggccgccggcctggagcgggcggagctgagcgggcgggtgctccagaagctg
atggacgagctggggcgggccgttccgcgcgggctggggcggcgggccgtctggccgctg
gccgggcgggcgcagctggaacgggtgctggccggtggttcccggtacgcggtcgaacag
gggtatggcacgccgcgcgacctggagcggtgcgaggacgggggcgcggtgggcggggcc
gatgccgccgcggtgagcgcgcgggcgatggaacgcgggctggggcagctgggcagcctg
gggtcgggcaaccactttctggaggtgcaggcggtctcggaagtccacgacgagatcgcc
gccaaggcgttcgggctcggtcccggccagatctgcgtgatgatccacagcgggtcccgc
gggctggggcaccagatctgcaccgaccatgtgcgggcgatggagaaggcgatgcggcgc
cattccatcagcgttccggaccggcagctggcctgcgccccggccggctccccggaaggg
cgggcctacctggccgcgatggccgccgccgccaactacgggcgcgccaaccgccagctg
ctcaccgaagccgcccggcgggccttccgcggcgtctgcgggacggatctggagctggtc
tacgacgtctcgcacaacctcgccaagatcgaaacgcatcgggtcgacgggacggcgcgg
cgattgtgcgtgcaccgcaagggcgcaaccttggccctgccgccccggcacccggacctg
ccggaggacctggccgacgtcgggcagcccgtgctcatccccggcagcatgggaaccgcc
tcctacgtgctggccggggtggcggccaacccggcgttcaactccacctgccacggcgcg
ggccggctgcacagccgtcaccaggcggccaaggcggtgagcgggcgggagctgcgcgac
cggctggagggcgcgggcatcgcggtgcgcggcgcctcctggcggggtctggccgaggag
accccggaggcctacaaggacgtcgatgcggtcgtcgccgccgccgaaggggccgggctg
tgccggacggtggcccgtctggtgccgctgggagtcgtcaagggctga
DBGET
integrated database retrieval system
