Thermomonospora curvata: Tcur_2667
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Entry
Tcur_2667 CDS
T01127
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
tcu
Thermomonospora curvata
Brite
KEGG Orthology (KO) [BR:
tcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcu03019
]
Tcur_2667
Enzymes [BR:
tcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Tcur_2667
Messenger RNA biogenesis [BR:
tcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Tcur_2667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
NACHT
AAA_30
PhoH
SLFN-g3_helicase
DUF6893
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACY98219
UniProt:
D1A5S4
LinkDB
All DBs
Position
complement(3111903..3115814)
Genome browser
AA seq
1303 aa
AA seq
DB search
MTTPLAELRQRLPQLMAEDRHRLRRRIDGACKLREETRLAAVTAKIAADVERAEAKVARR
RAAVPPITYPAELPVTQKKDEIAAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVLGT
IGHTQPRRLAARAVATRIAEELGTTLGELVGYKVRFTDTSSDDTLVKLMTDGILLAEIQG
DRLLRRYDTIIIDEAHERSLNIDFLLGYLKEILPRRPDLKVIITSATIDPERFSAHFGGA
PIVEVSGRTYPVEVRYRPIVDPDDPEADPDRDQIQAISDAVDELCAEGPGDILVFLSGER
EIRDTAEALAKRDLPGTEILPLYARLSAAEQQRVFQPHRGRRIVLATNVAETSLTVPGIK
YVIDPGTARISRYSHRLKVQRLPIEAISQASANQRKGRCGRVSEGICIRLYSQEDFESRP
EFTDPEILRTNLASVILQMTNLGLGDIAAFPFVDPPDRRNIKAGIDLLIELGALDPAAKD
PRKRLTPLGRKLAQLPVDPRLGRMVLEADRLGCVREVLIIASALSIQDPRERPADKQQAA
DEKHRRFADPSSDFLAYLNLWNYLQERQRELSGSQFRRMCKNEFLHYLRIREWQDLHGQL
KQVAKSLGVTVNTADAPPERIHQALLAGLLSHIGLLDPERRDYLGARGARFAIFPGSGLF
KKPPRWVMSAELVETSRLWARVNARIEPEWIEPLAAHLVKRTYSEPHWSKRQGAAMAYER
VTLYGVPIVTQRRVNYTRIDPELSRELFIRHALVGGEWDTHHAFFHENRALLEEVEELEH
RARRRDILVDEETLFDFYDQRIPAEVVSVRHFDAWWKKARRKNPDLLNFDKQMLINAGAG
EVSEADYPDHWQQGPLRLKLTYLFEPGADADGNDGVTVHIPLEVLNQVKADGFDWQVPGL
RAELVTELIRSLPKQLRVNFVPAPDVARKVLARLSPRTEPLLAALERELRAMTGVTVPRE
SWDYARVPDHLKMTFRVVDGRDRTVAEGKDLEALKRRLRGKVRGTLSSAAKKDGIERSGL
KSWDMDALPQVFERRHAGYAVKAYPALTDEGDSVAVRLYETPAEQRQAMWGGTRRLLLLN
SPSPMKFLTGGLSNQAKLALSRSPHGSVQALLDDCVTAAADKLMAEAGGPAWDAAGFTRL
HDHVRAELADTAAAIVGQVGQILSAAHEVDRRLRGTTSLALVPSLTDLRTQLKELIAPGF
VTATGWQRLPDLLRYLRAMLVRLDKLPDNPGRDRLLMQQVERMRQEYEQLLRRLPAARRQ
EEPVRHIRWMLEEFRVSLFAQQLGTRHPVSEKRILKAIAQIPL
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgccgctggccgagctacggcagcgactgccccagctgatggccgaggaccgg
catcggctgcgccgccgtatcgacggggcgtgcaagctgcgcgaggagacgcgcctggcc
gcggtgaccgccaagatcgccgccgacgtcgaacgggccgaggcgaaggtggcgcgccgc
cgggcggcggtgccgccgatcacctacccggccgagctgccggtcacccagaagaaagac
gagatcgccgcggccattcgcgaccaccaagtggtgatcgtggcaggggagaccggctcg
ggcaagaccacccagctgcccaagatctgcctggagctgggccgcggggtgctcggcacg
atcgggcacacccagccgcgccgcctggccgcccgcgccgtcgccacccgcatcgccgag
gagctgggcaccacgctgggggagctggtcggctacaaggtgcgcttcaccgacacctcc
agcgacgacacgctggtcaagctgatgaccgacggcatcctgctggcggagatccaaggc
gaccggctgctgcgccgctacgacacgatcatcatcgacgaggcccacgaacgcagcctc
aacatcgacttcctgctgggctacctgaaggagatcctgccccgccgccccgacctgaag
gtgatcatcacctcggcgaccatcgacccggagcggttctcggcgcacttcggcggcgcc
cccatcgtggaggtctccggccgcacctacccggtggaggtccgctaccgccccatcgtc
gaccccgacgaccccgaggccgaccccgaccgcgaccagatccaggccatcagcgacgcg
gtggacgagctgtgcgccgagggccccggcgacatcctggtgttcctgtccggcgaacgg
gagatccgcgacaccgccgaggcgctggccaaacgggacctgcccggcaccgagatcctg
ccgctgtacgcccggctgtcggcggccgagcagcagcgcgtcttccagccgcaccgcggt
cggcggatcgtgctggccaccaacgtcgccgagacctcgctgacggtcccgggcatcaaa
tacgtcatcgaccccggcaccgcccgcatctcccgctacagccaccgcctgaaggtccag
cgcctgccgatcgaggcgatctcccaggcatcggccaaccagcgcaagggccgctgcggc
cgggtctccgaaggcatctgcatccgcctgtattcgcaagaggacttcgaaagccgcccg
gagttcaccgacccggagatcctgcgcaccaatttggcctcggtcatcttgcagatgacc
aacctgggcctgggcgacatcgccgccttcccgttcgtcgacccgccggaccggcgcaac
atcaaggccggcatcgacctgctgatcgaactgggggccctcgacccggccgccaaggac
ccgcgcaaacggctcaccccgctgggccgcaaactggcccagctcccggtggacccccgc
ctgggccgcatggtgctggaggccgaccggctcggctgcgtccgcgaggtcctcatcatc
gcctccgccctgtccatccaggacccgcgggaacgccccgccgacaagcagcaggccgcc
gacgaaaagcaccgccgcttcgccgacccgtcctcggacttcctggcctacctgaacctg
tggaactacctgcaggagcggcagcgggagctgtccggcagccagttccgccgcatgtgc
aagaacgaattcctgcactacctgcggatccgcgaatggcaggacctgcacggccagctc
aaacaggtcgccaagagcctgggcgtgaccgtcaacaccgccgacgccccgcccgagcgc
atccaccaggcgctgctggccgggctgctgtcgcacatcgggctgctggaccccgaacgg
cgcgactacctgggcgcccgcggcgcccgcttcgccatcttccccggctcggggctgttc
aagaaaccgccgcggtgggtcatgtcggccgagctggtggagacctcgcggctgtgggcc
cgcgtcaacgccaggatcgaaccggagtggatcgaaccgctcgccgcccacctggtcaaa
cgcacctacagcgaaccgcactggtccaaacggcagggcgcggcgatggcgtacgaacgg
gtcaccctctacggggtgcccatcgtcacccagcgccgggtcaactacacccgcatcgac
ccggaactgtcgcgggagctgttcatccggcacgccctggtgggcggcgaatgggacacc
caccacgccttcttccacgagaaccgggcgctgctggaagaagtcgaggagctggagcac
cgggcccgccgccgcgacatcctggtcgatgaggagaccttgttcgacttctacgaccag
cgcatccccgccgaggtcgtctccgtccggcacttcgacgcctggtggaagaaggcccgc
cgcaagaatccggacctgctgaacttcgacaagcagatgctgatcaacgccggtgccggc
gaggtcagcgaggccgactaccccgaccactggcagcagggcccgctgcggctgaaactg
acctacctgttcgaacccggcgcagacgccgacggcaacgacggcgtcaccgtgcacatc
cccctggaggtcctcaaccaggtcaaagcggacgggttcgactggcaggtgccggggctg
cgcgccgaactggtcaccgagctgatccgctcgctgcccaagcagctgcgggtcaacttc
gtgcccgcccccgacgtggcccgcaaggtgctggcccggctctcgccccgcaccgagccg
ctgctggcggcgctggaacgcgagctgcgcgccatgaccggcgtcaccgtgccccgcgaa
agctgggactatgcgcgcgtccccgaccatctgaagatgaccttccgggtggtcgacggc
cgcgaccgcaccgtcgccgagggcaaggacctggaggcgctgaaacggcggctgcgcggc
aaggtccgcggcaccctctcaagcgccgccaaaaaggacggcatcgagcgcagcgggctg
aagagctgggacatggacgccctcccccaggtcttcgaacgccgccacgccggatacgcg
gtcaaggcctacccggcgctgaccgacgaaggcgacagcgtcgccgtgcgcctgtatgag
accccggccgagcagcggcaggccatgtggggcggcacccgccggctgctgttgctgaac
tcgccgtccccgatgaagttcctgaccggtgggctgagcaaccaggccaagctggccttg
agccggagcccgcacggctcggtgcaggcgctgctggacgactgcgtcaccgccgccgcc
gacaagctcatggccgaggccggcgggcccgcctgggacgcggcgggcttcaccaggctg
cacgaccatgtgcgcgccgagctggccgacaccgccgccgccatcgtcggccaggtcggg
cagatcctgagcgccgcgcacgaggtcgaccggcggctgcgcggcaccaccagccttgcg
ctggtgccgtcgctgaccgacctgcgcactcagctcaaggagctgatcgcccccgggttc
gtcaccgccaccggctggcagcgcctgcccgacctgctgcgctacctgcgggcgatgctg
gtgcggctggacaagctgcccgacaaccccggccgggaccggttgctgatgcagcaggtg
gagcggatgcggcaggagtacgagcagctgctgcgccgcctgcccgcggcccgccgccag
gaggagcccgtccggcacatccggtggatgctggaggagttccgggtcagcctgttcgcc
cagcagctgggcacccgccatccggtctccgaaaaacgcatcctcaaggccatcgcccag
atcccgctgtga
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