Thermomonospora curvata: Tcur_4337
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Entry
Tcur_4337 CDS
T01127
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tcu
Thermomonospora curvata
Pathway
tcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tcur_4337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcu03021
]
Tcur_4337
03400 DNA repair and recombination proteins [BR:
tcu03400
]
Tcur_4337
Enzymes [BR:
tcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tcur_4337
Transcription machinery [BR:
tcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tcur_4337
DNA repair and recombination proteins [BR:
tcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tcur_4337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ACY99864
UniProt:
D1A394
LinkDB
All DBs
Position
complement(4928220..4932098)
Genome browser
AA seq
1292 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDTEKRERDLPTLEAQISVERQQIEQRRDADIELRQQKLEAD
LAELEASGAKADAKRKLRDSAEREIKQLRDRAQRELDRLEEVWNRFKNLKVQDLEGDELL
YREMRDRFGQYFEGGMGARAIQARLENFDLEAEAEKLREIIRTGKGQKKARALKRLKVVS
AFLNTRNSPLGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPSDGKPVTMPTQDMVIGLYWLTTMKEGAKGEGR
AFSSPAEAVMAYDRGELDLQAKIQVRIKDTPPPRDWVAPEGYEPGQPYRLETTLGRCMFN
ETLPDDFPFVNIEVGKKQLSQIVNQLAENYPKVVVAAALDELKDRGFYWATRSGVTIAIE
DVVAPPNKERILAEYEARADKVQRQYDRGLITDEERRQELIEIWTHATAEVMEDMTKAFP
KDNPVWMMVNSGARGNPLQVRQIAGMRGLVSNPKGETIPRPIKSSFREGLSVVEYFISTH
GARKGLADTALRTADSGYLTRRLVDVAQDVIVREADCGTDRTITVRTAERAPDGSLVRPP
HAETSVIGRTIAEDVVVDGTVIVQAGADLSDAVLTRLIEAGVEEVRTRSSLVCESKIGVC
AACYGRSLATGKRVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITHGLPRVQEL
FEARVPKGVAPISEVAGRVKIEETEKAKKIIIVPDDGSDEVAYQVPMRARLMDGVREGAH
VEVGQQLIVGAQNPHEVLRILGPRAVQLHLVQEVQEVYRSQGVSIHDKHIEIIVRQMLKR
VNILESGDTDLLPGDLVERPVFEETNRKVVAEGGTPAAGRPVLMGITKASLATESWLSAA
SFQETTRVLTEAAMHAKSDPLLGLKENVIIGKLIPAGTGMPQYRNVRVEPTEEAKAAVYS
VGSYDDGAEYSFGQGSGEAVPLEEYDFGQYNR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagctgcggatcggcctggcgaccgccgacgacatc
cgtcagtggtcgcacggcgaggtcaaaaagcccgagaccatcaactaccggaccctcaag
ccggaaaaggacggcctgttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggtaagtacaagcgggttcgcttcaagggcatcatctgcgagcgctgcggcgtg
gaggtcacccgcgccaaggtgcggcgtgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggcgttccgtcgcggctgggctacctgctggacctg
gcgcccaaggacctggagaaggtcatctacttcgcggcgtacatgatcacctcggtggac
accgagaagcgcgagcgcgacctgcccacgctggaggcgcagatctcggtggagcgccag
cagatcgagcagcgccgcgacgccgacatcgagctgcgccagcagaagctggaggccgac
ctggccgagctggaggcctccggcgccaaggccgacgccaagcgcaagctgcgcgacagc
gccgagcgggagatcaagcagctgcgcgaccgggcccagcgggagttggaccgcctggag
gaggtctggaaccgcttcaagaacctcaaggtccaggacctggagggcgatgagctgctg
taccgcgagatgcgggaccgcttcggccagtacttcgaaggcggcatgggcgcccgcgcc
atccaggcccgcctggagaacttcgacctggaggccgaggccgagaagctgcgggagatc
atccgcaccggcaagggccagaagaaggcccgcgccctcaagcggctgaaggtcgtctcg
gcgttcctcaacacccgcaacagcccgctgggcatggtgctggactgcatcccggtcatc
ccgccggacctgcgcccgatggtgcagctggacggcggccggttcgccaccagcgacctc
aacgacctgtaccggcgggtcatcaaccgcaacaaccggctcaagcggctgctggacctg
ggcgcccctgagatcatcgtcaacaacgaaaagcggatgctccaggaggccgtcgacgca
ttgttcgacaacggccgccgcggccgtccggtcaccggcccgggcaaccgcccgctgaag
tcgctgagcgacatgctcaagggcaagcagggccggttccgccagaacctgctgggcaag
cgcgtcgactactccggccgctcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcccagaacatcaagtccgccaagcggatggtcgagcgcgcccgc
ccggtggtgtgggacgtgctggaggaggtcatcgccgagcacccggtgctgctgaaccgg
gcgccgaccctgcaccggctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctggtgtgcaccgccttcaacgccgacttcgacggcgaccag
atggcggtccacctgccgctgtcggccgaggcccaggccgaggcgcggatcttgatgctg
tcgaccaacaacatcctcaagccctccgacggcaaacccgtcaccatgcccacccaggac
atggtgatcggcctgtactggctgaccaccatgaaggagggcgccaagggcgagggccgg
gccttctcctcgccggccgaggccgtgatggcctacgaccggggcgagctggacctgcag
gccaagatccaggtgcggatcaaggacaccccgccgccgcgcgactgggtcgcccccgag
gggtacgagccgggccagccctaccggctggagaccacgctcggccgctgcatgttcaac
gagacgctgccggacgacttccccttcgtcaacatcgaagtgggcaagaagcagctgtcg
cagatcgtcaaccagctcgccgagaattacccgaaggtggtcgtggcggcggcgctggac
gagctgaaggaccgcggcttctactgggccacccgctcgggcgtgaccatcgcgatcgag
gacgtggtggcgcccccgaacaaggagcggatcctggccgagtacgaggcccgcgccgac
aaggtgcagcgccagtacgaccgcggcctgatcaccgacgaggagcgccgccaggagctc
atcgagatctggacgcacgccaccgccgaggtcatggaggacatgaccaaggcgttcccg
aaggacaacccggtgtggatgatggtcaactccggggcccgagggaacccgctgcaggtc
cggcagatcgccggtatgcgcggcctggtctccaaccccaagggcgagaccatcccgcgg
ccgatcaagtcctccttccgcgagggcctgtcggtggtggagtacttcatctccacccac
ggcgcccgcaagggtctggccgacaccgcgctgcgcaccgccgactccggttacctgacc
cggcgtctggtggacgtggcccaggacgtcatcgtccgcgaggccgactgcggcaccgac
cgcaccatcaccgtccgcaccgccgagcgggcccccgacggctcgctggtccggccgccg
cacgccgagaccagcgtgatcgggcggaccatcgccgaggacgtcgtggtggacggcacg
gtgatcgtgcaggccggcgccgacctgtcggacgcggtgctcacccggctgatcgaggcc
ggcgtggaggaggtgcgcacccgcagctcgctggtgtgcgagtccaagatcggtgtgtgc
gccgcctgctacggccgctcgctggccaccggcaagcgggtggacgtcggtgaggcggtc
ggcatcatcgccgcccagtccatcggcgagcccggcacccagctgaccatgcggaccttc
cacaccggtggtgtggccggggcggacatcacccacggtctgccgcgtgtgcaggagctg
ttcgaggcccgcgtccccaagggcgtggccccgatcagcgaggtggccggccgggtcaag
atcgaggagaccgagaaggccaagaagatcatcatcgtcccggacgacgggtccgatgag
gtcgcctaccaggtgccgatgcgggcccgcctgatggacggggtccgcgagggcgcccac
gtggaggtcggccagcagctcatcgtgggtgcccagaacccgcacgaggtgctgcgcatc
ctcggcccccgcgcggtgcagctgcacctggtccaggaggtccaggaggtctaccgctcg
cagggcgtgtcgatccacgacaagcacatcgagatcatcgtccgccagatgctcaagcgg
gtgaacatcctggagtcgggcgacaccgacctgctgccgggcgacctggtggagcggccg
gtcttcgaggagaccaaccgcaaggtggtggccgagggcggcacccccgccgccggccgt
ccggtcctgatgggcatcaccaaggcctcgctggccaccgagtcgtggctgtcggcggcc
tccttccaggagaccacccgggtgctcaccgaggcggccatgcacgccaagagcgacccg
ctgctgggcctgaaggagaacgtcatcatcggcaagctcatcccggccggtaccggcatg
ccgcagtaccgcaacgtccgggtcgagcccaccgaggaggccaaggccgcggtgtactcc
gtcgggtcctacgacgacggcgccgagtactccttcggccagggctccggcgaggccgtc
ccgctggaggaatacgacttcggtcagtacaaccgctga
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integrated database retrieval system
