Thermomonospora curvata: Tcur_4952
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Entry
Tcur_4952 CDS
T01127
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tcu
Thermomonospora curvata
Pathway
tcu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tcur_4952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcu03400
]
Tcur_4952
Enzymes [BR:
tcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Tcur_4952
DNA repair and recombination proteins [BR:
tcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Tcur_4952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACZ00468
UniProt:
D1A8F3
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All DBs
Position
5601115..5601885
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AA seq
256 aa
AA seq
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MRIGAHVDQHDPLAGARAVGAEVVQFFLGDPQGWKKPVVPEAVAELDGSGVDVYIHAPYV
VNVATSNNRIRVPSRRILSEQLQAAAQIGAKALIVHGGHVLSGDDPEVGFENWRKVFERI
DCPIPIYIENTAGGGNAMARRLDRIARLWEVLGQVPGIDGKLGFCLDTCHAHAAGEELID
VVDRIKAITGRIDLVHCNNSRDAFGSGADRHANLESGTIDTELIVSVVRSAGAPVVVETP
PAGQAADIALLRAALT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggagcccacgtcgaccagcacgaccccctggcgggcgcccgcgccgtcggg
gcggaggtcgtgcagttcttcctcggcgatccgcagggctggaagaagccggtggtgccc
gaggcggtcgccgaactggacgggtccggggtggacgtctacatccacgccccgtacgtg
gtcaacgtggccacctccaacaaccggatccgggtgcccagccgccggatcctcagcgag
cagctgcaggccgccgctcagatcggcgccaaggcgctgatcgtgcacggggggcacgtg
ctgtccggcgacgaccccgaggtgggctttgagaactggcgcaaggtcttcgagcggatc
gactgcccgatcccgatctacatcgagaacaccgcgggcggcggcaacgccatggcccgc
cggctcgatcggatcgcccggctgtgggaggtgctgggccaggtccccggcatcgacggc
aagctcggtttttgcctggacacctgccatgcgcacgcggccggcgaggagctgatcgac
gtggtcgaccggatcaaggcgatcaccggccggatcgacctggtgcactgcaacaacagc
cgggacgccttcggctcgggcgccgaccggcacgccaatctggaaagcggcacgatcgac
accgagctgatcgtgtcggtggtgcggtcggccggggccccggtggtggtggagacccct
ccggccggtcaggccgccgacatcgccctgctgcgcgccgcgctcacctga
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