Hydrogenovibrio crunogenus: Tcr_0012
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Entry
Tcr_0012 CDS
T00296
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcx03032
]
Tcr_0012
03400 DNA repair and recombination proteins [BR:
tcx03400
]
Tcr_0012
Enzymes [BR:
tcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tcr_0012
DNA replication proteins [BR:
tcx03032
]
Prokaryotic type
DNA Topoisomerases
Tcr_0012
DNA repair and recombination proteins [BR:
tcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tcr_0012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
ABB40609
UniProt:
Q31JR4
LinkDB
All DBs
Position
13889..16330
Genome browser
AA seq
813 aa
AA seq
DB search
MTQEAENPIQPEYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNGIDEAL
AGHCDKVVVTIHTDGSVSVTDNGRGIPVGLHEEEGVSAAEVIMTVLHAGGKFDDNSYKVS
GGLHGVGVSVVNALSEELHLTIKREGHVWKQTYRHGVPDEPLKAVSETDETGTEIRFLPS
RETFTQTEFSFDYLLKRLRELSFLNSGVHIELLDKRDDRHEVFEFEGGIRAFVDYINANK
TPINQEAFYFSTVRDDITVEVAMQWSEAYQESIFCFTNNIPQRDGGTHLSGFRAALTRTL
NQYAEKEGLTKKYKMSVSGDDAREGLAAVISVKVPDPKFSSQTKDKLVSSEVKTAVETAM
NEKLAEYLLENPKDAQSVFAKIVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEK
DPARSELYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLASAEVGTLITA
LGCGIGHEEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPP
LYKVKKGKQEAYLKDDAELENYLLQSALDQAALWTSKETPAIQGVALETLAKSFLQTNRI
IDRLARRFSKTFLELMLDLSPIHVETLNDYDACEKWIADALPRLRAIGEIQKVEYQLQVE
PALQGETQFQIRLQQREHGTLTSQIYDEDFFAAAEYDHIAKVAKQLKGLLSETAYIQRGE
KQENVSSFKEAMDWLLSEAKRGQSIQRYKGLGEMNPEQLWETTMNAEARRLLQVTISDAI
TADQVFTTLMGDEVEPRRNFIESNALKAENIDV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaagctgaaaatccgatccaaccagaatacgattcttcctcgattaaggtt
cttaaaggactcgacgccgttcgtaaacgtcctggaatgtatattggtgataccgatgat
ggcaccggtctgcatcatatggttttcgaagtggtggataacgggatcgatgaagccctc
gccgggcattgcgataaagttgttgtcaccattcataccgacggctctgtctcagtcacc
gataacggtcgaggcattccggttggacttcatgaagaagaaggcgtttcagcggccgaa
gtcattatgaccgtccttcatgccggtgggaaattcgatgataactcctataaagtgtcg
ggtggtttgcacggggttggggtctcggtcgttaacgccttatccgaagagcttcattta
acgattaaacgagaaggccatgtttggaaacaaacgtatcgtcacggcgtgccagacgaa
cctttaaaagcggtttcggaaacagatgaaaccggtacggaaattcgtttcctacccagt
agagaaacgtttactcaaacagaattcagttttgattacttattaaaacgtcttcgtgag
ctttctttcctgaactccggggttcacatcgagctcttggataaacgcgatgatcgccat
gaagtctttgaatttgaaggtggcattcgagcattcgttgattacatcaacgctaataaa
actccaattaaccaagaagcgttttatttttcaaccgttagggacgacattacggttgaa
gtcgccatgcaatggtcagaggcttaccaagaatctattttctgtttcaccaataacatc
cctcaaagagacggtggaacgcatttatccggtttccgtgcggcccttacacgtacgctg
aaccaatatgctgaaaaagaaggcctaacgaaaaaatacaaaatgagtgtgtcgggtgac
gatgcgcgtgaaggacttgccgcggttatttcggtcaaggtaccagatccaaaattctca
tcacaaaccaaagacaagctcgtttcatctgaagtcaaaacagccgttgaaacggctatg
aacgaaaaactggctgaatatctattggaaaacccaaaagatgctcaatcggtctttgcg
aaaattgtagatgcagcccgtgcgcgtgaagcggctcgtaaagcacgtgaaatgacgcgc
cgtaaaggggctcttgatattgcagggttgcctggaaaactggcagactgtcaagaaaaa
gaccctgcacgatcagaactttacctagtggagggtgactcagcgggcggttcggccaaa
caagggcgtgatcgtcgtactcaagccatcctgccgttaaaagggaaaatcctgaacgtt
gaaaaagcacgttttgataaaatgctggcgtcggccgaagtcggtaccttgatcaccgcg
ttaggttgtgggatcggacatgaagaatacaacccagacaaactgcgttatcaccgcatt
atcattatgacggatgctgatgtggatggttctcacattcgaacgcttttattaacattc
ttctatcgccaaatgccggagctaatcgaacgcggttacatctatatcgctcagcctcct
ctttacaaggtgaaaaaaggtaagcaagaagcttacttaaaagacgatgccgagctggaa
aactatttactgcaatcggctttagatcaggctgcattatggacgtcaaaagagacccct
gccattcagggcgtagcgctggaaacgttagcgaaaagcttcttgcaaaccaaccgcatc
attgatcgtctggcacgccgtttcagcaaaacattcctggaattgatgttggatttaagt
ccgattcacgttgagaccttaaatgattatgatgcctgtgaaaaatggattgctgacgcg
ttaccacgcttgagagccattggagaaatccaaaaggttgagtaccagcttcaagtggaa
ccggctttacaaggtgaaacacagttccaaatccgtttacagcagcgtgagcatggcact
ttaacctcacaaatttatgatgaagatttcttcgcagcagcggaatatgaccacattgcc
aaggtggcgaagcagctgaaagggctgttgtccgaaaccgcttatatccaacgtggtgaa
aaacaagaaaatgtttcaagctttaaagaagcgatggattggttgctcagtgaagcgaaa
cgcggtcaaagcatccagcgttataaaggtttgggggaaatgaacccagagcaattatgg
gaaacaaccatgaatgcggaagccagacgtttattacaagtcactatttcagatgccatt
acagcagaccaagtgtttacaacgctgatgggagatgaagtggaaccacgtcgtaacttc
attgaatccaatgcattaaaagctgaaaacattgatgtgtaa
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