Hydrogenovibrio crunogenus: Tcr_0035
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Entry
Tcr_0035 CDS
T00296
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tcr_0035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcx03000
]
Tcr_0035
Transcription factors [BR:
tcx03000
]
Prokaryotic type
Helix-turn-helix
Other families
Tcr_0035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA_2
GAF_3
Mg_chelatase
AAA_3
AAA_19
AAA_16
MCM
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABB40632
UniProt:
Q31JP1
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Position
42903..44597
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AA seq
564 aa
AA seq
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MKHVEHLDIANQSEYIVIKEAAEQIEKAYEPQKAIHTILSLISRQMGLNRGRVLLQESSS
GFLHTAYAYGLTKEEIAQGRFATSEGVSGKVMHTGSPIIIADIDREDDYLFRTVDRSTLP
SETVAFIATPIIRNGTVVGVLAVNRLAKRSRSLDRDLSVLKLISLFISEILAVHAMIEQK
TQVLKEENEQLRAMALGQGSQYGIIGESASLRAALNKVGRATNTAVTVLLTGESGTGKER
FSRMLHLASHRQDNPFIAINCAAIPTDLLESELFGHEKGAFTGATQTKQGKIELANNGTL
FLDEIGDLDFGLQAKLLRVLEERCVTRVGATKPIHVDTRIIVASHKDLHEAVNQGHFRLD
LFYRLNVFPIELPPLRERDGDIRLLARHFLNQANQEYHTSAIYDKGAMAFLEDYEWPGNI
RQLENVVKRSVLMADNGRLISARLIEKIIQEESAIIHGGHVKPLENQIPTSVKTDSWNTQ
ENAINNSFHQEVNSTDAIGNKNSMAWAYDQSLMNDKRAYWRVSEEESEQLKQALEMARGN
KTRAALLLNMTPRQFSYRMKKLDL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatgttgaacatttagatattgcaaatcagtcagaatatattgtcataaaagaa
gcggctgaacaaattgaaaaggcctatgaaccgcaaaaagccattcataccattctcagt
ttgatttcacgtcaaatgggcttaaatcgaggacgagttttgcttcaagaaagctcttca
ggctttcttcatacagcctatgcctatggactgaccaaagaagaaattgcgcaaggtcgc
ttcgcaaccagtgaaggggtttccggcaaagtcatgcacacgggaagccccattattatt
gctgatattgatcgcgaagatgactatctattccgtaccgtcgatcgttcaacgcttccc
tctgaaaccgtcgcatttatcgctaccccgatcattcgaaatggcaccgtggtcggtgtt
ctagcggtcaaccgtctggccaaacgttcacgctctcttgatcgagatttaagcgttctg
aaattgatttccttattcatcagtgaaatcttagctgtacacgccatgattgagcaaaaa
actcaggtattaaaagaagaaaacgagcagcttcgagccatggcactcggtcagggaagt
caatatggcattattggagaaagtgcgtcactcagagccgccttaaacaaggttggccgt
gccaccaatactgccgtcacagttttgctaacaggagaatcaggcacggggaaagagcga
ttttctcgcatgcttcatttggcatcacaccgacaagacaatcctttcattgccattaac
tgtgccgcgattccaacagacttactggaatctgaactctttgggcatgaaaaaggggct
ttcacaggcgccacccagaccaaacagggcaaaatcgaactcgccaataacggcacccta
ttcctcgatgaaatcggggacctggacttcggcctgcaagccaaactgttgcgcgtgtta
gaagagcgctgcgtcactcgtgtcggcgccaccaagccgattcatgtggacacccgaatt
attgtcgcttcccataaagatttacatgaagctgttaaccaaggtcattttcggcttgat
ttattttatcgtctcaatgtgtttccgattgagttgccaccgcttcgagagcgtgatggc
gacattcgattactggccagacattttctcaaccaagccaatcaggaataccataccagt
gccatttacgacaaaggcgccatggcattcctggaagattatgaatggccgggcaacatc
cgccaattggaaaatgtcgtgaaacgttctgtgctgatggccgataacggtcgcttaatt
tcagcacgattgattgaaaaaatcattcaggaagagagcgccattatccatggaggccat
gttaaacctcttgaaaatcaaataccgacatccgtgaaaaccgattcttggaatacacaa
gagaatgctataaataattcctttcatcaggaggttaattctactgatgctatcggcaat
aaaaatagtatggcatgggcatacgatcaatctctgatgaatgataaacgcgcctattgg
cgtgtttcggaagaggaatcagaacagttaaaacaagccttggaaatggcacgtggtaac
aaaactcgggccgcacttctactcaacatgactccacgccaattcagttaccgcatgaaa
aaactggatttataa
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