Hydrogenovibrio crunogenus: Tcr_0044
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Entry
Tcr_0044 CDS
T00296
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx03030
DNA replication
tcx03410
Base excision repair
tcx03420
Nucleotide excision repair
tcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tcr_0044
03410 Base excision repair
Tcr_0044
03420 Nucleotide excision repair
Tcr_0044
03440 Homologous recombination
Tcr_0044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcx03032
]
Tcr_0044
03400 DNA repair and recombination proteins [BR:
tcx03400
]
Tcr_0044
Enzymes [BR:
tcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tcr_0044
DNA replication proteins [BR:
tcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tcr_0044
DNA repair and recombination proteins [BR:
tcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tcr_0044
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tcr_0044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABB40641
UniProt:
Q31JN2
LinkDB
All DBs
Position
52701..55520
Genome browser
AA seq
939 aa
AA seq
DB search
MTQILPEFNPDSPFILVDGSSYLFRAFHAMPPLTNTKGHATGAIFGVINMIGKLLEQYQP
ERIAVVFDAKGKNFRHELYEDYKAHRPPMPDELRIQIEPIHEIIKALGIPLLVIDGVEAD
DVMGTLAHQATQAKMDALLSTGDKDMAQLVNEHITLVNTMNDTLMTPDSVFEKFHVKPEQ
IIDYLALMGDSSDNIPGIPKCGPKTAAKWISEYGSIDNLIEHAEEIKGKIGENLRANLEQ
LKLSQQLTTIRLDCDLPIALNDIKRHEADMEALEALFSEYDLRNWLTRVLKGELPFSKSS
GRKAHSETVTNGQSKKANTSPSTETPKADSQPYETIVDWHTFDQWLKKLEASDVFAIDTE
TTSLNAMEAKIVGVSFAYAEKKDQAWQNFAAYVPLTHDYDGAPEQLPIQEVLAKLKPLLE
NPAIKKVGQNFKYDWHIFKNAGIEVQGMAYDTMLESYCFNSVATRHNMDDLALTYLNHST
IHFKDIAGTGKKQKTFNQIELETASPYAAEDADITLQLHQTLLPKLQAEPTLYKVFEEIE
MPLMPVLAKMERNGVLIDRQMLADQSYELGQKLTELEQKAHLIAGTPFNLNSSKQLQEVL
FERLELPIVKKTPKGQPSTAEPVLVQLAEDGHEMPNLILEYRSLAKLKSTYTDSLPKQIN
QQTGRVHTSYQQAVASTGRLSSTEPNLQNIPIRSAEGRRIRQAFIAQPGYRLMASDYSQI
ELRIMAHLSGDASLLKAFAEGKDIHQATAAEIFNMPLEEVTSEQRRSAKAVNFGLIYGMS
AFGLAKQLNISRGLAQEYINLYFARYPGVANYMESTKENAKQTGYVETLMGRRLYLPDIN
AKNGQLRQYAERTAINAPMQGTAADIIKTAMVKMQQWLDQTPCDIKMLMQVHDELVFEVA
EADMDQARKEIKTIMEAALKLDVPLIVEIGDGLNWDEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaatccttcctgaattcaatccagacagtccttttatcttagttgacggctcg
tcttacctgttccgggcgtttcatgccatgccacccttgacgaacaccaaagggcatgcc
accggggcgattttcggtgtcatcaatatgattggaaagttattagagcaataccaaccc
gaacgcattgcggtggtatttgatgccaaaggaaaaaattttcgccatgaactctatgag
gactacaaagcccatcgcccgccaatgccagatgagttgcgcattcagattgaaccgatt
catgaaatcatcaaagcattgggcattcctttgttagtgattgatggtgtggaagccgat
gatgtgatgggcaccctggcccaccaagccacccaggcgaaaatggacgcgctgctgtca
accggggataaagacatggcgcaattggtgaatgaacacattacccttgttaacaccatg
aatgatacgttgatgacacctgacagtgtgtttgaaaagttccacgtgaaacctgaacag
attattgattatctggccttaatgggcgatagcagtgacaacattcctggcattcccaaa
tgtggtcccaaaaccgccgcaaaatggatttccgaatatggctctattgataatttgatt
gagcatgcggaggaaattaaaggcaaaatcggtgaaaatttacgtgccaatttagaacaa
ctgaaattatcacaacagttaaccaccattcgactggattgcgacctaccaattgcactt
aatgacatcaaacgccatgaagcggatatggaggcactggaagccctgttttctgaatac
gacttacgtaactggttaacccgcgtattaaaaggcgaactgcctttcagtaaaagcagc
ggtcgaaaagctcattccgaaaccgtcactaacggccagtcaaaaaaagccaatacctct
ccgtcgacagagacaccaaaagcggattcgcaaccttatgaaaccattgtcgactggcac
actttcgatcaatggcttaaaaagctcgaagcatcggatgtttttgcgattgataccgaa
accacttccttaaatgctatggaagcaaaaattgttggtgtcagctttgcctatgctgaa
aaaaaggaccaggcctggcagaattttgcggcgtatgtgcccttaacccacgactatgac
ggtgcaccggaacaattaccgattcaagaggtattggcaaaattgaaaccgcttctggaa
aacccagccatcaagaaagttggccaaaattttaaatatgactggcacattttcaaaaat
gcgggcattgaagtccaaggcatggcgtatgacaccatgctggaatcttactgttttaac
agtgttgcaacacgccacaatatggatgatttggcgttgacgtatctaaaccacagcacc
attcattttaaagacattgccggtacaggaaaaaaacaaaaaacctttaatcagattgaa
ctggaaacagcttcaccttatgccgcagaagatgcggatatcacgctgcaactgcatcaa
acattgctaccgaaactgcaagccgaaccgactttatataaggtctttgaagaaattgaa
atgccattaatgcctgtcttggcaaaaatggaacgaaatggcgtgttgattgatcgtcaa
atgttggcagaccagtcttatgaactgggacaaaaactcactgagctggaacaaaaagcc
catttaatcgctggcacaccgtttaatttgaattcctccaaacaattacaggaagtgctg
tttgaacgcctggagcttcctatcgtgaaaaaaaccccgaaaggtcaaccttccaccgcg
gaaccggtgctggtgcagttggcggaagacggtcacgaaatgccaaatttaattctcgaa
tatcgtagtttggcaaaattaaaatcaacctacaccgattctttaccaaagcaaatcaat
caacaaacgggacgcgtccatacttcttatcaacaagcggtggcctcaactgggcgttta
tcttcaacagagcccaatttacagaacattccgattcgaagcgccgaaggacgacgtatc
cgtcaggcatttattgcccaaccaggttatcgcttaatggcctcggattactcgcaaatt
gaattgcgcatcatggcgcatttatcgggcgatgcgagtttattaaaggcttttgccgag
ggcaaagacattcaccaggcgaccgcggccgaaatttttaacatgccgttagaagaggtc
acatccgaacaacgccgcagtgcgaaagcggtcaacttcggattgatttatggcatgtca
gcctttgggttagcaaaacaactcaacatcagccgagggttggcacaagaatacatcaac
ctttattttgcgcgttatcccggcgtggcaaattatatggaatccacaaaagaaaacgcc
aaacaaactggctatgttgaaaccttaatgggtcgtcgactgtatttaccagatattaat
gccaaaaatggtcaattaagacaatatgcggaaagaaccgccatcaacgcaccgatgcaa
ggcacggccgccgacatcatcaaaactgccatggtgaaaatgcagcaatggctcgatcaa
accccgtgtgatatcaaaatgttaatgcaagtgcacgatgaattggtttttgaagtggct
gaagccgatatggatcaagccagaaaggaaatcaagaccattatggaagccgctttaaag
ctcgatgtgccattgattgttgaaattggcgacggcctaaattgggatgaagcacactga
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