Hydrogenovibrio crunogenus: Tcr_0120
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Entry
Tcr_0120 CDS
T00296
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tcr_0120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcx03400
]
Tcr_0120
Enzymes [BR:
tcx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Tcr_0120
DNA repair and recombination proteins [BR:
tcx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tcr_0120
Prokaryotic type
Tcr_0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Whib
EndIII_4Fe-2S
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ABB40716
UniProt:
Q31JF7
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All DBs
Position
152983..154035
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AA seq
350 aa
AA seq
DB search
MSDLEEFSQTLLEWFDRSGRHDLPWQQNKTPYRVWVSEIMLQQTQVQTVIPYYERFMKAF
PSVEALAQASQEEVLSHWSGLGYYARGRNLLKAAQIVVDELQGKFPQDLEGMMALPGIGR
STAGAVLSIASQQRHPILDGNVKRVLCRYDAVESWSGEKQTEAMLWQRANELTPEQRFDD
YTQAIMDLGATLCTRSKPKCEACPVQKNCQAWRLDRVSDFPYPKPKKAKPTRETAMMIFL
NENRQLFLQQRPQKGIWGGLWSLPEMPLDPLETLIKSKVETLCDERLNLIKWPLFKHTFS
HYHLMIHPFFLDKVSSIKMEGEWFTVSEALTKGLPAPIRKLINQLENSND
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttagaagaattttcgcaaaccttactggagtggtttgatcgctcaggccgc
catgacttaccttggcagcagaataagacgccttatcgagtgtgggtgtcggaaatcatg
ttgcagcaaacgcaagtacaaaccgtcattccatactacgaacggtttatgaaagctttt
ccatccgttgaagctttggcgcaagccagtcaggaagaggtactgtctcattggtccggg
ctaggctattacgcacgagggcgtaatttactgaaggctgcacaaatcgtcgtggacgag
ttacagggaaaatttccgcaggatttggagggcatgatggccttaccagggattggacgt
tctacggcaggtgccgttttatccatcgcgagtcagcagcgtcatcctattttggatggc
aatgtgaagcgcgttttatgtcgctatgatgcggttgagtcttggtccggtgagaaacaa
accgaagccatgctgtggcaaagggccaatgagctgacccccgagcaacgatttgatgat
tatacacaggcgattatggatttgggtgcgacgctttgcacacgctcaaaaccaaaatgc
gaggcctgtccggttcaaaaaaactgccaggcctggcggttagatcgagtgtcagatttc
ccgtatcccaaaccgaaaaaagcgaaaccgactcgtgaaacggccatgatgatttttttg
aatgaaaatcgacagctttttttacagcaacgaccgcaaaaagggatttggggtggcctc
tggagcttaccagaaatgccgcttgacccgcttgaaacccttattaaaagcaaggttgaa
accctctgtgacgaacgacttaatctgataaaatggccgttattcaaacacactttctct
cattatcatttaatgattcatccattttttctggataaagtttcttccataaagatggag
ggagagtggtttacggtgtcggaggcattaacaaaaggcctaccggcccctattcgaaaa
ctcattaaccaattggagaacagcaatgactag
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