Hydrogenovibrio crunogenus: Tcr_0216
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Entry
Tcr_0216 CDS
T00296
Name
(GenBank) Pseudouridylate synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcx03016
]
Tcr_0216
Enzymes [BR:
tcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Tcr_0216
Transfer RNA biogenesis [BR:
tcx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tcr_0216
Prokaryotic type
Tcr_0216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABB40812
UniProt:
Q31J61
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All DBs
Position
255878..256918
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AA seq
346 aa
AA seq
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MPNPISLSHFAFAYGRPENTAVLKAEPADFQVDEHIAYTLSGEGEHLWVWVQKIGQNTDW
VAKQIASWAGITAKEMGVAGKKDRQAITRQWMSLHLPGKQAPDIGSLDVPGVTLLKAMRH
HRKLQTGGLSGNRFTLVLREINGNLDQIETRLQKIAGKGVPNYFGEQRFGNDFQNLAKAT
ALFQGQIKSPKRHQKSLYISAARSWIFNEILSQRVRQGTWNRAISGDVFQLEGSQKWFAD
DSDPSLSKRVEEKGLHPTGALTGRGVLPSQSDAFQVEQAVLEKHPFWQAGLEKLGLKQER
RALRVLPKEMHWEWLDQQTLSVGFDLPAGSYATMVMRELFEVKLED
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaccctatctccctatcccattttgcttttgcatatggtcgtcctgaaaacacg
gcggttttaaaagccgagccagccgattttcaagtggatgagcacattgcttatacgttg
agcggggaaggtgagcatttatgggtgtgggtacaaaaaattgggcagaacactgactgg
gttgctaagcaaattgccagttgggccggcatcacggccaaagaaatgggcgttgcgggt
aaaaaagaccgtcaagccattactcggcaatggatgagtttgcacctacctggaaaacaa
gcaccggatatcggaagtctggacgtgccaggcgtcacacttttaaaagcaatgcgacat
catcgaaaactgcaaaccggtggcttgtcgggcaatcgatttaccctggtgttgcgtgaa
attaacggtaatctggatcaaatcgaaacccgcttgcagaaaattgctggcaagggcgtg
ccgaattatttcggagagcagcgctttggaaatgattttcagaaccttgcgaaggccacc
gctttatttcaaggccagattaaatccccaaaacggcaccagaaatcgttatatatttcc
gcggcacggtcttggatttttaatgaaattttgagtcaacgtgtgcgccaaggaacttgg
aatcgagccatctcaggtgatgtcttccaattggaaggctctcaaaaatggtttgccgat
gatagcgatcctagcttatccaagcgggttgaagaaaagggtttacaccctaccggtgcg
ttaaccggtcgaggtgtattgccgtcgcaaagtgacgcatttcaagtggaacaggccgtg
ctggaaaagcatccgttttggcaggccgggttggaaaaactcggcttaaaacaagagcgt
cgtgcgttaagagtcttaccgaaagaaatgcattgggaatggctggatcaacaaacctta
tccgtcggcttcgatttgccagctggcagctatgccacaatggtgatgcgcgaattattt
gaggtcaagctggaagattaa
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