Hydrogenovibrio crunogenus: Tcr_0440
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Entry
Tcr_0440 CDS
T00296
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcx03000
]
Tcr_0440
03036 Chromosome and associated proteins [BR:
tcx03036
]
Tcr_0440
03400 DNA repair and recombination proteins [BR:
tcx03400
]
Tcr_0440
Transcription factors [BR:
tcx03000
]
Prokaryotic type
Helix-turn-helix
Other families
Tcr_0440
Chromosome and associated proteins [BR:
tcx03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Tcr_0440
DNA repair and recombination proteins [BR:
tcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Tcr_0440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ABB41036
LinkDB
All DBs
Position
complement(493629..493892)
Genome browser
AA seq
87 aa
AA seq
DB search
MTLLSDKNPASQALSTHVTMTLKNYFETLEGEVPSDVYQMVISQVERPLIEFVLNETAFN
QSRSAEILGINRNTLRKKMQLYKITPA
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgacattactatctgataaaaatccagccagccaagcactcagcacgcatgtcaccatg
acgctgaaaaactattttgaaacgctggaaggtgaagtaccgagtgatgtttatcaaatg
gtgataagccaagtggaacgcccgctcattgagtttgttttaaacgagaccgcgtttaat
caaagtcgatcagccgaaatattaggtattaaccgaaataccttaagaaagaaaatgcag
ctttataaaataacacctgcataa
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