Hydrogenovibrio crunogenus: Tcr_0801
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Entry
Tcr_0801 CDS
T00296
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcx03016
]
Tcr_0801
Enzymes [BR:
tcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tcr_0801
Transfer RNA biogenesis [BR:
tcx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tcr_0801
Prokaryotic type
Tcr_0801
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF5010
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
ABB41397
UniProt:
Q31HH6
LinkDB
All DBs
Position
873536..874324
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AA seq
262 aa
AA seq
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MTLLAIGIEYQGTAYCGWQHQKHCDSVQQQLEKALSYIADEPIGLNCAGRTDTGVHAIGQ
IAHFETNASRPDKAWIQGVNTQLPNDIRVTWVKPMPEDFHARFSAVARQYRYVIFNRPVH
SAILANRVTWENRPLDVKKMHAAAQDLLGENDFSSFRAAGCQASHANRNVQYLQVSRQGN
FVFVDIQANAFLHHMVRNIVGTLLEVGRLDKPVEWVSELLKKQDRTQAGMTAPAAGLYFV
NALYPESFELPRVVLDELLWQA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgactttattggcgattggtattgaataccaaggcaccgcttattgtggttggcagcat
cagaaacattgcgattctgttcagcaacaacttgaaaaggcattatcgtatatcgctgac
gaaccaattggtttgaattgtgcgggtagaaccgatacaggtgtgcatgcgattgggcag
atcgcgcattttgaaacgaatgccagtcggccggataaagcatggattcaaggcgttaac
acccagttacccaatgacattcgggtaacatgggtgaaaccgatgccagaggattttcac
gcacggttttctgctgttgcccggcaataccgttatgtcatatttaatcgacccgttcat
tctgccattttagccaatcgtgtgacttgggagaatcgtcctttagatgtgaaaaaaatg
catgccgctgctcaggatttattgggtgaaaatgatttttcatcttttcgcgcagcgggt
tgccaagcctctcacgccaatcgtaatgtacagtatttgcaggtgtcacgccaaggcaat
tttgtctttgttgatattcaagccaatgcttttttgcaccatatggttcgaaacattgtc
ggtaccttgttggaggtggggcgattggacaaacccgttgaatgggtatcggagttgctc
aagaagcaagaccgaactcaagccggcatgacagcgccagcggcagggttgtattttgtg
aatgcactgtatccggaatcgttcgaactaccacgagttgttttggatgaattactttgg
caagcttaa
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