Hydrogenovibrio crunogenus: Tcr_1122
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Entry
Tcr_1122 CDS
T00296
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcx03021
]
Tcr_1122
03009 Ribosome biogenesis [BR:
tcx03009
]
Tcr_1122
Transcription machinery [BR:
tcx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Tcr_1122
Ribosome biogenesis [BR:
tcx03009
]
Prokaryotic type
rRNA transcription factors
Tcr_1122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF4332
MRP-S35
KH_KhpA-B
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABB41717
UniProt:
Q31GK6
LinkDB
All DBs
Position
1210101..1211588
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AA seq
495 aa
AA seq
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MSKEVLAVVEIMSNEKGVEKEIIFEAIEAALATATRKSHNDEIDARVSIDRHTGDYETFR
RWEVIEDDVEIEDHVGWYIRHMDAVDIEPHIEPGEFIEEPMESIEFGRIGAQTAKQVIIQ
KVREAERKKVVEEYSKRIGEILTGQVKRIDRGDVILDLGDNVDAVIPRSELINRENFKMG
DRVRAYVQDVSFRPRGPQIFMSRACKEMLMELFKIEVPEIGDDLIDIMSAARDVGLRAKV
AVRANDPRLDPIGACVGMRGGRVQAVTNELNGERIDIILWDSNDAQFVINAMAPAEVTSI
MVDEDKHTMDLAVDDEQLSQAIGKNGQNIRLATELTGWELNVMSETDMAAKHETESKGQM
DLFVNGLEVDEELAEVLVAEGFTTLEEVAYVPAAEMLEIEGFDEEIVAALKERAKDALLT
QAIANEEKTAMAEPAQDLLDLEGMTEEMAKTLASKGIITQEDLAELGTDELLEIVEMDAD
AASELILKARAPWFE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaagttttagcagttgttgaaatcatgtctaacgaaaaaggcgtggaaaaa
gaaattatctttgaagccattgaagcggctctagcgacagcaactagaaaaagtcataat
gatgaaattgacgcccgtgtttctattgatcgacatacgggtgattacgaaactttccgt
cgctgggaagtgattgaagacgatgtcgagattgaagaccacgttggttggtatattcgc
catatggatgcggttgacattgaaccgcatattgagccaggtgaatttattgaagaacca
atggagtcgatcgaatttggccgtattggtgcgcaaacagcgaagcaagtgattattcaa
aaagtccgtgaagctgagcgtaaaaaagtggtcgaagaatattcgaaacgcatcggagaa
attttaactggtcaggttaagcgtattgatcgcggtgatgtcattctggatttaggggat
aacgtggatgcggtcattcctcgttcagaattgattaaccgcgaaaactttaaaatgggc
gatcgtgtccgtgcttatgttcaagatgtttctttccgtcctcgcggcccacagattttc
atgtctcgtgcgtgtaaagaaatgttgatggaactgtttaaaatcgaagtgcctgaaatt
ggtgacgacttaatcgacattatgagtgcggctcgtgatgttggtttaagagccaaggtg
gccgttcgtgctaacgacccacgcttagatcctatcggagcttgtgtcgggatgcgtggt
ggacgtgttcaagcggtgacaaatgaattaaatggagaacgtatcgacattatcctttgg
gattcaaacgatgcgcagtttgttattaatgcgatggccccagcagaagtcacgtccatt
atggtggatgaagacaagcatacaatggacttggcggttgatgatgagcagttgtctcag
gccattggtaaaaacggtcaaaacatccgcttggcaaccgaactaacaggttgggagctg
aatgtcatgtctgaaacggacatggctgcgaagcatgaaacagaatcgaaaggtcagatg
gatttattcgtcaacggcttggaagtcgatgaagaacttgcagaagttctagtcgcagaa
ggttttacaacacttgaagaagtggcgtatgttccggctgcggaaatgttagagattgaa
ggctttgatgaagaaattgttgcagctttaaaagaaagagctaaagacgcactgttgact
caagcaattgcaaacgaagaaaagacagccatggctgaaccagcgcaagatttattggac
ttagaaggcatgactgaagaaatggcaaaaacgctcgcttctaaaggaatcatcactcag
gaagatttagctgaattaggcacggatgaattattagaaatagtagagatggatgcggac
gcagctagcgaattgattttgaaagcacgcgcaccatggtttgaataa
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