Hydrogenovibrio crunogenus: Tcr_1125
Help
Entry
Tcr_1125 CDS
T00296
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcx03016
]
Tcr_1125
Enzymes [BR:
tcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tcr_1125
Transfer RNA biogenesis [BR:
tcx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tcr_1125
Prokaryotic type
Tcr_1125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABB41720
UniProt:
Q31GK3
LinkDB
All DBs
Position
1214582..1215493
Genome browser
AA seq
303 aa
AA seq
DB search
MAKKQWQKIDGIVLLNKPEGVTSNGLLQQVRRVYNAKKAGHTGALDPFATGLLPICLGEA
TKISGLLLDSDKRYIATLQLGLETDSGDKDGNPLKTIAVPALSKAMLETVFSQFEGDVMQ
VPPMYSALKHQGKPLYEYARKGIHIERAARPIHIYELKLIDFENTVVRFEVLCSKGTYVR
TLGEDIAKALGTVGHLTGLHRTQTGALTGDEMATLEEIELNKDAYLQPLDLPLKHLQAIH
LNAKDTDKILHGGKLAVEEPETLLVRFYDPQQRFIGVGEWQQEKQLLKPKRLFNLNPIGD
DHS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagcagtggcaaaaaattgacgggattgtgcttctaaacaagcccgaaggc
gtaacttcaaatggattgttacaacaggtaaggcgtgtttataatgccaaaaaagcgggg
catacaggggctttagatccttttgctactggattgttacctatttgtttaggggaagcg
acgaaaatttccggcttgttgttagactccgataaacgttatattgccacattgcaatta
gggcttgagacggattctggcgataaggatggcaatcctttgaaaactatcgccgttcct
gcattgagcaaagcgatgttggaaacggtattctctcagtttgagggcgatgttatgcag
gttccgcctatgtattcggctttaaagcatcaaggaaaacctttatacgaatatgctcga
aagggcattcatattgagcgtgcggcccgtccaattcatatttacgaactcaagttgatt
gattttgaaaacacggttgtgcgttttgaagtgttgtgttcaaaaggtacttacgtcaga
acactcggggaagatattgctaaagctctaggaacggtcggacatttaactggattgcat
cgaacgcaaacaggtgcgttgaccggagatgaaatggcgaccctggaagaaattgagttg
aataaagacgcttatcttcaacccttggatctaccgctaaagcatcttcaagcgattcat
ttaaatgcgaaagatacggataagattctacatggtgggaaactggccgttgaagagcct
gaaacccttttggtacgcttttacgacccgcagcaacgttttattggggttggcgagtgg
cagcaagaaaaacaattgctgaagcctaagcggttgtttaatctcaaccctatcggcgac
gatcactcttaa
DBGET
integrated database retrieval system
