Hydrogenovibrio crunogenus: Tcr_1180
Help
Entry
Tcr_1180 CDS
T00296
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcx03032
]
Tcr_1180
03036 Chromosome and associated proteins [BR:
tcx03036
]
Tcr_1180
03400 DNA repair and recombination proteins [BR:
tcx03400
]
Tcr_1180
DNA replication proteins [BR:
tcx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Tcr_1180
Chromosome and associated proteins [BR:
tcx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Tcr_1180
DNA repair and recombination proteins [BR:
tcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Tcr_1180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
HTH_31
Xre-like-HTH
HTH_24
HU-DNA_bdg
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABB41775
UniProt:
Q31GE8
LinkDB
All DBs
Position
1288095..1288367
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVSAIAEEAGLTKADAAKALEATVSTVTKALSSGDSVAIIGFGTFKVGERSARTG
RNPQTGAEMQIPAAKVPKFSAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaccgaattagttagtgcgatcgctgaagaagctggtttaacgaaagccgat
gcggcaaaagctcttgaagcaactgtatcaacagtcacaaaagctttaagctctggtgac
tctgtagccatcattggttttggtacttttaaagttggtgagcgttcagcacgtactggt
cgtaaccctcaaacaggtgcagaaatgcagattcctgctgctaaagttcctaagttctcg
gctggtaaagcgttaaaagaagctgttaactaa
DBGET
integrated database retrieval system
