Hydrogenovibrio crunogenus: Tcr_1265
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Entry
Tcr_1265 CDS
T00296
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcx03009
]
Tcr_1265
Ribosome biogenesis [BR:
tcx03009
]
Prokaryotic type
ribosomal protein modification factors
Tcr_1265
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
ABB41860
UniProt:
Q31G63
LinkDB
All DBs
Position
complement(1380317..1382071)
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AA seq
584 aa
AA seq
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MVEQTFIKGKDACLEDSINKMQTLLTTAGFEIEEASWLNPVPNVYSVHIRDKNCPALFTN
GKGASRKATLASALGEFFERLETNYFFSDFYLEEALVNREDDVSWNERGLYFPDEKVFEL
SDFRQCLSPELWEIYDPEGEMVAEDLLSLNDAEPKIRCLPLTNASSHDTVYFPMNLFSNL
YASNGLSAGNTPEEALVQGLSEVFERWVKRKILTENLCLPEVPEAIVQRYPTVVKARKAL
QEQGIDVSIRDSSLGGHFPVMNVTLFEQKTGRCFASFGAHPIFEVALERTLTESLQGRSL
DMLDGFQLPVFDEGLVADDENIENHFIDSSGLIHAKFISHQYDFEFNEWDFDGDTQAQYD
LLIKKVHEQGAEVYFAHYDHFGINACRIVVPEMSEVFPMHELVDNNQNRGRVLREILLEL
SLSDKADRFENALEQIEMMGFSEHQGVANLIGLLPDPNSYWKKFKIVELQMWLLLAVKDY
EMAYERLQECHYFVDDEAMALFYKALGFALDVLLEDSLTEYPLSVQAQLFGEKIIEKVWR
NINGEEVFGGLDIGMKAFENSQNHQALMTVYQKVQRVKHLANTQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacaaacatttattaagggtaaggatgcttgcttagaagattctattaataaa
atgcaaaccttattaactacagccgggtttgaaattgaagaagcttcttggctgaacccg
gttccaaatgtttattccgtccatattcgagataaaaactgcccggctttgtttaccaat
ggtaaaggtgccagccgtaaagccacgttggccagtgctttgggcgagttttttgaacgt
ttagaaacaaattatttcttttccgatttttatttggaagaagcgctcgtaaatcgcgag
gatgacgtttcgtggaatgaaagaggattgtactttccggatgaaaaagtatttgagctg
tcagattttcgccagtgtttaagccctgaactatgggaaatttatgatcctgaaggggag
atggttgcggaagatttattaagtttgaatgatgccgaaccaaaaattcgttgcttgccg
ttaacgaatgcatcctctcatgacaccgtttatttcccaatgaacttgttcagtaacttg
tatgccagtaatggcttaagtgcggggaatacaccggaagaagcacttgttcaggggttg
tcagaagtgtttgaacgttgggtgaaacggaaaatattgaccgagaatctttgtttaccc
gaggtacccgaagccattgttcagcgttatccaacggtcgtcaaggcacgaaaagcgttg
caggaacaagggattgatgtctctatccgagacagctctttaggagggcattttcctgtc
atgaatgtgactttgtttgaacagaaaactggtcgttgttttgcttcatttggcgcgcat
ccaatttttgaagtagcactggagagaactttgaccgaatctttacagggtcgaagtctc
gatatgttagatgggtttcagttacctgtttttgatgaaggccttgttgcggatgatgaa
aatatcgaaaatcattttattgactcaagtgggttgatccatgcaaagtttatctctcat
caatatgactttgaatttaatgaatgggattttgatggcgacacacaagcgcaatatgat
cttttaattaagaaagtgcatgaacagggcgcggaagtctactttgcccattatgatcac
ttcggcattaatgcctgtcgtattgttgtgccggaaatgtcggaagtgtttcctatgcat
gaactggtggataataatcaaaatagaggtcgtgtactacgagaaatcttattagaactc
tctttatctgataaagcggatcgctttgaaaatgctttagaacaaatagaaatgatgggc
ttttcagaacatcaaggcgtcgcgaatttaattggtttgttgccagatccaaattcttac
tggaaaaaatttaaaatcgttgaactgcaaatgtggttactactggctgttaaagactat
gaaatggcttatgagagactgcaggaatgtcattattttgttgatgatgaagccatggct
cttttttacaaggcacttggctttgctttggacgttctgttggaagactcgttaaccgaa
tatccgctttcggtgcaagctcaattgtttggtgaaaaaatcattgaaaaggtttggcga
aatattaatggtgaagaagttttcggtggattggacatcggaatgaaggcgtttgaaaac
agccaaaatcatcaggccctaatgaccgtttatcaaaaggttcaacgtgttaaacatctt
gcgaacactcagtaa
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