Hydrogenovibrio crunogenus: Tcr_1444
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Entry
Tcr_1444 CDS
T00296
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx02020
Two-component system
tcx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tcr_1444
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tcr_1444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tcx02022
]
Tcr_1444
02035 Bacterial motility proteins [BR:
tcx02035
]
Tcr_1444
Two-component system [BR:
tcx02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Tcr_1444
Bacterial motility proteins [BR:
tcx02035
]
Flagellar system
Flagellar assembly proteins
Others
Tcr_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
AAA_16
Mg_chelatase
MCM
AAA_7
AAA
HTH_28
OKR_DC_1_N
nSTAND3
AAA_3
FleQ
HTH_23
AAA_22
ATPase
Myosin_head
HTH_24
AAA_30
NPHP3_N
PDE8A_N
MerR
Motif
Other DBs
NCBI-ProteinID:
ABB42036
UniProt:
Q31FN7
LinkDB
All DBs
Position
complement(1561069..1562448)
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AA seq
459 aa
AA seq
DB search
MSIAKILVVEDDKELQEALVDTLELNGFDVVSVGSAEEALVALDDEIAMVFTDIRMDGMN
GYDLMKRIRAIKPYLPIVLMTAYGTVEQAVEAMKSGAVDYILKPFEADVLVEKAKAYFYR
DASAEEDFVVADATTIQLKSMAKKVAESDASVLITGESGTGKEVLARFIHNHSTRSKQPF
VAINCAAIPENMLEATLFGYEKGSFTGAMKAMPGKFELAQGGTIFLDEIGEMKPDLQAKL
LRVLQEREVERIGSSKLIKLDVRVLSASNVDMKKAMADGNFREDLFYRLNVFPMRIPPLR
ERPKDIAAIAERLLQRHCGGRRVEPMMSAPAMRSLIQFQWPGNIRELDNVIQRALVMMSG
ETIQEQDILFDDSFHQDGETTQANGVKEMGRSDVEVLQPASIDGQSPSTDLKEREVQIIL
ETLKANNGHRQKTAEALNISPRTLRYKLARFKEQGLDVL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgctaagattttagtggtagaagatgataaagaattacaagaagcattagtt
gataccttagagcttaatggatttgatgttgtttctgtcgggtccgccgaagaggcactt
gttgctttggatgatgaaattgccatggtttttaccgatattcgtatggatggtatgaat
ggctacgatttgatgaagcgtattcgagctattaagccatatcttcccattgtattgatg
acggcttatggaacggttgaacaagccgttgaagccatgaaatcaggcgcggtggattat
atattgaaaccatttgaagcagacgtattagtggaaaaagcgaaagcttatttttatcga
gacgcgtcggcagaagaggattttgtggtggccgatgcgacaactattcagctgaagtcg
atggcaaaaaaagtggcggaaagtgacgcttccgttttaattactggagaaagtgggact
gggaaagaggttctggctcggttcattcataatcattccacacgaagcaagcagcctttt
gttgccatcaactgtgcggctatccctgaaaacatgctggaagccaccttgtttggttat
gaaaaaggttcttttacaggcgcaatgaaagcaatgccaggtaagtttgagctggcccag
ggcggaaccatttttttagatgaaattggggaaatgaagccggatttgcaagccaaactg
ttaagggttttgcaagagcgagaagtggagcgcataggtagctctaagttgattaaactg
gatgtgcgtgtattaagtgcatccaatgttgatatgaaaaaagcgatggctgacggcaat
ttccgagaagatttgttttatcgtttaaatgtttttccaatgcgtattccgcctctgaga
gaacgtccaaaagacattgctgctattgcagagcgtttattacaacgtcattgtggcggc
cgaagagtggagccaatgatgtctgcgcctgccatgcgttcattaattcagtttcagtgg
ccaggaaatattcgtgagcttgataatgtcattcagcgggcattggtgatgatgtctggt
gaaacaatccaagaacaggatattttatttgatgacagttttcatcaagacggcgagact
acacaggcgaacggtgtgaaagaaatggggcgttcagacgtcgaagttctgcaacctgct
tcaatagatggtcagtcgccttcaacagacttgaaagagcgtgaagtacaaattatttta
gaaacgttaaaagcgaacaatggtcatcgtcaaaaaacggctgaggcattgaatattagt
ccaaggactttaagatataaattagcgcggtttaaagagcaagggttggacgttttataa
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