Hydrogenovibrio crunogenus: Tcr_1519
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Entry
Tcr_1519 CDS
T00296
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Tcr_1519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcx02000
]
Tcr_1519
Enzymes [BR:
tcx01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Tcr_1519
Transporters [BR:
tcx02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Tcr_1519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_24
DEAD
RsgA_GTPase
nSTAND3
AAA
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
AAA_15
AAA_25
AAA_33
AAA_5
NACHT
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABB42111
UniProt:
Q31FG2
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All DBs
Position
1654661..1656406
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AA seq
581 aa
AA seq
DB search
MFDRHTLSLYKRLLKYISGYKSAIFITLITIAIIAATEPLSAIILGNLVDESLIEKDPNS
FLLLPLQLAAVFIVKGVAEYFSKVMSTWIAQKAIFNIRSELYDKMLCLPQAEHNQTSTGT
LMSKVTYDVTQTGNALSEAWIVIARDSLTILALLATLIYYSWQLTLVMLIIGPIVAFFID
RAGKLMRTSSTDMQDNMGEMTHRLEEGLKGYQDIKIYGSEKYELDRFKASAESLRQNTMK
VIKVSALNVPLVQVIAAIALSIVVYIAVQMVNAETMTAGNLITYVTAMGLIFEPIRRITN
INATVQRGMAAAKSIFAILDTPSEANNGKIELSNVNGQIDFNNVSFSYLGTEKTALNNFS
LSIPARKTTALVGQSGSGKTTLANLITRFYQVNHGTITIDGIALDEIELNNLRANIAFVS
QNVVLFNDTIAANIAYGHEEYDEQAIMNAAKAAHAWEFIEKLPEGLNTIIGDNGTLLSGG
QRQRLAIARAFLKNAPILIMDEATSALDNQSEKLIQEAMNSLRKNRTVIIIAHRLSTIEN
ADKIVVLEEGSLKEQGTHAELMALNSIYSQLYKQGNLSEQV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcgtcacaccctctcgctttacaaaaggttactgaagtatattagtggctac
aaatccgccatttttattaccttaatcaccatcgcaatcattgccgctacagaaccactt
agtgcaatcattcttgggaatctggtagacgagagtttaattgaaaaagatccgaactct
ttcctacttctaccgcttcaattagcggccgtcttcatcgtcaaaggcgttgctgaatat
ttcagtaaagtcatgagcacctggattgcccaaaaagccattttcaatatccgctcagaa
ctctatgacaaaatgttgtgtttaccgcaagcagagcacaatcaaacctctacaggcaca
ctcatgtctaaggtgacgtatgatgtcacccaaacaggcaatgccctttctgaagcatgg
attgtcatcgccagagacagcctaaccattcttgccctactggcaactttaatttactac
tcttggcagttaaccttagtcatgctgattattggccccatcgtggcctttttcattgat
agagctggcaaattaatgcgcacttccagtacagacatgcaagacaatatgggagaaatg
acgcaccggttagaagaaggtttaaagggctaccaagacattaagatttatggctctgaa
aaatacgagcttgaccgattcaaagcctctgcagaatctctacgtcaaaacacaatgaaa
gtgatcaaagtgtccgctttgaatgttccgttggttcaggttattgccgcaattgctttg
tccatcgttgtgtatatcgcggtacaaatggtcaatgccgaaaccatgaccgccggaaat
ttaattacttatgttaccgccatgggcttaatctttgaacccatccgaagaatcactaac
atcaatgcaaccgttcaaagaggaatggccgccgctaaaagtatctttgctatattagac
accccaagtgaagccaacaacggcaagatcgaattatcgaacgtcaacggccaaattgat
ttcaacaacgtctcattttcttatctaggcactgaaaaaaccgcactaaataacttttcc
ttaagcattccagctcgtaaaaccaccgctttagtcggtcaatcgggtagcggaaaaaca
accttagcgaatttaatcactcgcttctatcaagtcaaccatggcacgattacaattgat
ggcattgctcttgatgagatagaactgaataatcttcgagccaatattgcatttgtcagc
caaaatgtggtgttgtttaatgacacgatcgctgccaacatagcttatggacatgaagaa
tatgacgaacaagccattatgaatgcggctaaagccgctcatgcctgggagtttattgaa
aaattacccgaaggactaaacaccatcattggtgataatggaacacttctatcaggtggt
caacgccaacgattagcgattgcgagagcctttttaaagaatgcgcctattttgattatg
gacgaagccacttcggcattggacaatcaaagtgaaaaactgattcaagaagcgatgaat
tctctcagaaaaaaccgaactgtgatcatcattgcccatcgattgagcacgattgaaaat
gccgataaaatcgtagtattggaagaaggttctctgaaagagcaaggcactcacgctgag
ctaatggccttaaattctatttacagtcaattgtacaaacaaggtaatcttagtgagcaa
gtttaa
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