Hydrogenovibrio crunogenus: Tcr_1582
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Entry
Tcr_1582 CDS
T00296
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcx03016
]
Tcr_1582
Enzymes [BR:
tcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Tcr_1582
Transfer RNA biogenesis [BR:
tcx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Tcr_1582
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
IFT52_central
Motif
Other DBs
NCBI-ProteinID:
ABB42174
UniProt:
Q31F99
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All DBs
Position
1731162..1732319
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AA seq
385 aa
AA seq
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MDYKIINQQADLDAFCELLKTCPWIALDTEFVRTDTYFSILSLIQIQTHDGQAAIIDPLA
IEDLTALWSIISNPNVRKVFHSARQDIEVLYQVSGQMPISIYDTQIACLFLQHGDLAGLA
RVVKAELNFTLEKDQTRTNWQQRPLTDKQLEYAINDVRYLAPLYEKLQAELTEQQQAALE
EDFQALLNEDLYKIDIKAAGKKIKAAKKLSRKNKAIAYKLAEWREQFAIENNKPKRWVMS
DEVLVAIAKRPPKTPEALYKVPHIKASSVKNYGAEWIELIDDVFESPDDWPKPTASSMPA
TPQDEVLISIGFALIQQITIDYNVNPNNVANKSDLLKMIQSDSFMLRGWRGLLLGQPFTQ
FLQNQMLLSCENGKLVQKTFTPNTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggattataaaataattaaccaacaagccgatttagacgccttttgcgagcttcttaaa
acttgcccttggatagcactcgatacagaatttgttcgaacagatacttatttttcgatt
ctcagtttaattcaaattcagactcacgacggtcaagcggcgatcattgacccgttggca
atcgaagacttaacggctttatggtcgattattagcaacccgaatgtgcgaaaagtcttc
cattcagcgcgccaagacattgaagtattgtaccaagtctctggtcaaatgccgatttca
atttatgacacccaaattgcctgtttattcttacaacatggtgatttagcaggtctggcc
agagtggtcaaagccgaactcaattttactttagaaaaagaccagacacgaaccaactgg
caacagcgccctctcaccgacaagcaattagaatacgccatcaatgatgtccgttatttg
gcccccctttacgaaaagctgcaagctgaattaacagaacagcaacaggccgctttggaa
gaagacttccaagctcttttgaatgaagatttatataaaatcgacatcaaagcggctggt
aaaaaaatcaaagcggccaaaaaactttctcgtaaaaataaagcgattgcatacaagtta
gcggaatggcgtgagcagtttgcgattgaaaacaacaaaccaaaacgttgggtcatgtcc
gatgaggtattggtcgccattgcaaaacgtcctccaaaaacacccgaggcactttacaaa
gtgccccacatcaaagcatcttcggtaaaaaattacggtgcggaatggattgagttaatc
gacgacgtgtttgagtcccctgatgattggccaaaaccaacggcctcatctatgccggcc
acaccacaagatgaggtattaatctccatcggcttcgctcttattcaacagatcaccatt
gattacaatgtgaacccaaacaatgtcgccaacaaatcggatcttttaaaaatgattcaa
tcggattcgttcatgttaagaggatggcgcggcttgttactggggcaaccctttacccag
tttttacaaaatcagatgcttttaagctgtgagaacggaaagttagttcaaaaaactttc
acgccaaacacgcattaa
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