Hydrogenovibrio crunogenus: Tcr_1883
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Entry
Tcr_1883 CDS
T00296
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
tcx
Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcx03009
]
Tcr_1883
Enzymes [BR:
tcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tcr_1883
Ribosome biogenesis [BR:
tcx03009
]
Prokaryotic type
rRNA helicases
Tcr_1883
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABB42473
UniProt:
Q31EF0
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Position
2060150..2061355
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AA seq
401 aa
AA seq
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MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL
QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQ
SKIDILVATPGRLLNIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIPGDFQA
ACFSATLAGSGITKFAEEVLDSPEIIQVNAPNEKSEQIQQWVYLANDKAHKKALLKAILE
DETCQSAIVFCNKKDRAIELADWLQNEHISSTVLHGDFIQAKRLEKTQKFKQGKIKVLVA
TDVAARGLDILNVTHVINYDVPYRGDIYIHRIGRTGRAQQVGIAINLVERHDITNLQRIE
YHLQQSLPVSKIKGLEPNFKLKDVLKKPKKKKKKSTKKKKK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgaagaattagaccttgatcccaaactccttacggcgattgaagagcagcat
taccacaaaccgacccccatccaggcggaagcgattcctgaaatgctgttgagcaaagac
gtgctggctggagctgcaacaggaacaggcaaaacggccgcctttgtgttaccggcctta
caatttttgttagacgatcccagaccaagccgcaaaccgagagtgctgatcttagcccca
acgcgagaactggcttttcaaatccataaagtggttaaacagttaggcgcccactgccct
tttgaatcgaatgtcgtgacaggcggtttcgcttcagacaaacagctggaaatcttacaa
tcgaaaatagacatactggtggccacaccgggtcgtttgttaaatattatgagcaaagag
tttattgatctttcagacattgaactcctgatcattgatgaagcagatcgtatgctggat
atgggccaaggccctgatgttttagcattgattgaagccattccaggtgactttcaggcg
gcctgtttttcagccactctagctggctcgggcatcacaaagtttgccgaagaagtgctc
gactctcctgaaatcattcaagtgaatgcaccgaatgaaaaatccgaacaaattcaacaa
tgggtttatctggcaaatgataaggcacataaaaaagctctactcaaggcaattttggaa
gatgaaacctgccaaagcgccattgtgttctgcaacaaaaaagaccgggcgatcgagttg
gccgactggcttcaaaacgagcatatttccagtaccgtcttacacggtgattttattcaa
gccaagcgtctggaaaaaacccaaaaattcaaacaaggtaaaatcaaagtattggttgcc
accgatgtggctgcacgcggcttagacattttgaatgtgacccatgtcattaactatgac
gttccgtatcgtggggatatctacattcaccgaatcgggcgcacaggacgcgcacagcaa
gtggggatcgccattaacctggtggaacgtcatgacataaccaacttgcaacgcattgaa
tatcacttacaacaatctcttcctgtcagtaaaatcaagggacttgagccaaacttcaaa
ttaaaagatgtgctcaagaaaccgaagaaaaagaagaagaaatccaccaagaaaaagaaa
aaataa
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