Thiomicrospira cyclica: Thicy_0021
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Entry
Thicy_0021 CDS
T01517
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00550
Peptidoglycan biosynthesis
tcy01100
Metabolic pathways
tcy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Thicy_0021
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Thicy_0021
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcy01003
]
Thicy_0021
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tcy01011
]
Thicy_0021
Enzymes [BR:
tcy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Thicy_0021
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Thicy_0021
Glycosyltransferases [BR:
tcy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Thicy_0021
Peptidoglycan biosynthesis and degradation proteins [BR:
tcy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Thicy_0021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
SH3_9
Motif
Other DBs
NCBI-ProteinID:
AEG30797
UniProt:
F6DB57
LinkDB
All DBs
Position
complement(19989..22388)
Genome browser
AA seq
799 aa
AA seq
DB search
MSRPIAKRPAPTPLPKRRWLRRLFLWPIYAGLLLTLLVATYAGYLYQKLPDPNSLKNVSY
QVPLRIETSDGKVITEIGEKRRIPLEYPEIPIRMIQAIISAEDDRFYQHFGIDFKGIARA
TYELISTGSIQSGGSTITMQVARNFFLTRDRSFERKFHEIILSLKIEQTLTKQEIMALYL
NQIFLGHRSYGVAAAAQTYYGKPIHELDIHEFAMIAGLPKAPSAFNPIANPARATLRRNY
VLRRMHELGYITQDQFTTALAQPIEVTLTGVRIETEAGYIAEMARQFALERFGETALEQG
LTIRTTIRSNHQDHANAALRSGLLEYDRRHGYRGHVAQLDPSLLDDADAIQALMREYPQP
GGLRLGLVMAVNDSEAKLQLRNGDVIALTFNQANWARADRGLDRLGPAPTQLDQIFQAGD
LVYLTQSSDNQWLLAQNPRAEAALVSINPRNGEIIALVGGFDFFKSRFNRVTQAKRQLGS
AYKPFLYSGAFELGITAATVINDAPVVFHDAALEDIWRPENYTGRFYGPTRVREALIHSR
NLVPIRLLQEVGVAPIINHSQRFGFDLAELNRHRNLSLALGSAQFTPLEAARAYAVFANG
GSLIEPYFVREVRDFNGQVIYQANPLQACGLQCDERDPGIAPRAISKQNAFMITSILQDV
IAQGTGRQAAALNRKDLAGKTGTTNQQFDAWFVGYNPDVVTSVWVGNDQPSGLGRRETAG
RAALPIWIDYMRHAVADSPNIPFLQPEGLVYVPIDRSTGQTVPADTPGAYFELFYPDQAP
EIPVIRPNNLRDLTRELFQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaccgattgcaaaacgccccgctcctacccctctgccgaaaaggcgctggcta
aggcgtttatttttatggccaatctatgccggcttgttactaacgctactggtagctacc
tatgcaggctatctctaccaaaaactgcctgacccgaatagtttaaaaaatgtcagctat
caggttccgttacgcattgaaaccagcgatggcaaagtcatcactgaaattggcgaaaag
cgccgcattccgctggaataccccgaaattcctattcgtatgattcaagcgattatttct
gctgaggatgaccgtttttatcaacattttggcatcgatttcaaaggcattgcacgtgca
acctacgaactaatatcaaccggaagcattcaatccggcggctcaaccattaccatgcaa
gtggctcgtaatttcttcttaacccgtgaccgctcctttgaacgtaagtttcatgaaatt
atcctttcgctcaaaattgaacaaaccctcactaaacaagaaattatggccttgtatctc
aaccaaattttcttgggtcatcgctcctatggcgtagccgctgcggcacaaacttattat
ggcaaaccaatccatgagcttgatattcatgagtttgcgatgatagcaggcctgcctaaa
gccccttcggcatttaacccaattgcgaatccggcccgtgctacccttcgccgtaactat
gttctgcgccgtatgcacgaacttggctatattactcaagaccaatttactaccgccctt
gcacaacctattgaagtgaccttaaccggtgtacgcattgaaaccgaagccggttatatt
gctgaaatggcacgtcaatttgctttagaacgctttggtgaaaccgctcttgaacaaggc
ctgaccattcgaaccacaattcgcagtaaccatcaagatcacgccaatgcggcgttacgt
tccggcttgctagaatacgatcgacgccatggttatcgaggtcatgtcgctcagctcgac
cctagcctgctcgatgacgcggacgctatccaggccctgatgcgcgaataccctcagccc
ggaggcttacgccttggcttagtcatggcggtcaatgacagcgaagcaaaactgcaacta
cgtaatggcgatgtgattgcacttacgtttaaccaagctaactgggctcgagcggatcgc
ggcttggaccgactgggccccgcccctactcagctggatcaaatttttcaagcgggtgac
ttggtctatctaactcaaagctcagacaatcaatggctgttagcgcaaaacccgcgtgcc
gaggccgcactggtgtcaatcaacccgcgtaatggcgaaattatcgcgctggtcggtggt
tttgatttcttcaaaagtcgctttaaccgcgtcacacaagccaaacgtcagctgggttcg
gcctataaacccttcctttattccggggcgtttgagctgggtattaccgctgccaccgtg
attaatgacgcgccggtggtgtttcacgatgccgcgctagaagatatatggcgcccagaa
aactataccggtcggttctatggccccactcgcgttcgtgaagccttaatccactcacgt
aatttggtacctattcgactgttacaagaagtcggtgttgcaccgattattaaccactca
cagcgatttggttttgatttggcggaactcaaccgtcaccgcaatttgtcactggcattg
ggttccgctcaatttacgccactcgaagccgcccgtgcctatgcggtatttgccaatggt
ggctcgcttatcgagccctattttgtgcgtgaagtacgcgattttaatggtcaggtcatt
taccaagctaaccctttgcaagcctgtggtctacaatgtgatgaacgtgatcccggcatt
gccccgcgcgcgattagcaagcaaaacgcctttatgattacttcgattctgcaagatgtc
attgcccagggcaccggccgccaagccgccgcccttaatcgtaaggacctagccggcaaa
accggtactaccaaccaacaatttgatgcctggtttgtgggctataacccggacgttgtc
accagtgtctgggtcggtaacgatcaaccctccggcttaggccgtcgtgaaaccgccggt
cgcgcggcattgcccatttggattgactatatgcgtcacgccgtggccgattcacccaat
attccctttttacaacccgaaggcttagtatatgtgccgatcgaccgcagtactggtcaa
acggtgcccgccgacacccctggcgcatactttgagctattttatcccgaccaagcaccg
gagatcccggtcatacgtcccaacaatttacgggacttaacccgagaattattccaataa
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