Thiomicrospira cyclica: Thicy_0182
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Entry
Thicy_0182 CDS
T01517
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_0182
Enzymes [BR:
tcy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Thicy_0182
DNA repair and recombination proteins [BR:
tcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Thicy_0182
Prokaryotic type
Thicy_0182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEG30958
UniProt:
F6D9K1
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All DBs
Position
complement(177969..179405)
Genome browser
AA seq
478 aa
AA seq
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MNQLIWFQRDLRLNDHTPIHRALSQNEPTLFAYFHDPQQAQGEANQVWLAASLSKLQTAL
QAKNADLLVAEGEFSQAFERVLTTYNVKNVLYHFELGEPYQTIQQQALAVCQRLKVRLTP
FDQAWLPPESVLTQQGNPYGVYTPFSKKVFSMLDGVPKPEGEANWSNFQPVTLENHDRQL
PSRLKAIANTDWAKPLISQWKVGEQAAINQATHFLTTHIQHYPERRDFPAINGTSQLSIH
LHFGEISSTRLLESCRQAQANQPGHSEAIQSFIRQLIWREFSRYLLFFNPGLINQAYQSK
FNQIDWPEPDDQVVAWQRGLTGVPIIDAGMRQLWHTGWMHNRVRMLVGSWLTKNLNQHWL
VGQAWFENTLLDADIANNVMGWQWVAGCGVDAAPYFRLFNPVVQSEKFDPQGHYIRQWLP
ELAPLPNQLIHAPWDAAGKIKQQFPTLAANYPLHDPNLKQVRLDHQQRVQALKMMTNA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttaatttggtttcaacgtgacttacgtttaaacgatcacacgcctatccac
agagcgctaagccaaaacgaaccgacgttgtttgcttattttcatgaccctcagcaggct
caaggtgaagctaaccaggtctggctagccgctagcttaagtaaacttcaaacagcttta
caagctaagaacgcggacctacttgttgctgaaggtgaatttagtcaggcatttgagcgc
gtgcttaccacctataatgttaaaaacgtactctaccactttgaactcggggaaccctat
caaaccattcagcaacaggcgctagctgtttgtcagcgcttaaaggtaagactaactccc
tttgaccaggcctggctgcctcctgaaagcgtgctaacacaacaaggtaacccctatggc
gtttacaccccgtttagtaaaaaggtgttcagtatgctggatggggttcccaaaccagag
ggcgaagccaactggagcaattttcaaccggtaacgctggaaaatcatgaccgccaatta
cccagtcgtctaaaagcgattgcgaatactgactgggccaaaccacttattagccaatgg
aaggttggcgaacaagccgccattaaccaggcaacgcactttttaacaactcacattcag
cactacccagagcgacgagactttcctgctattaacggaaccagtcaactgtcgatccac
ttgcattttggggaaatcagctcaacacgattgcttgaatcatgccgacaagctcaagcc
aaccaacccgggcatagtgaggctattcaaagctttattcgtcaactgatttggcgggag
ttttcgcgttatttattattttttaacccaggcttaattaaccaagcctaccaaagcaag
tttaaccaaatcgactggcccgagcctgatgaccaagtagttgcttggcaacgagggctc
acaggcgttcctattattgatgcgggtatgcggcagctttggcatactggttggatgcat
aatcgcgttagaatgctagtggggtcttggttaactaaaaaccttaatcagcactggcta
gttggccaggcctggtttgagaatacattgttagatgctgatattgcaaataatgttatg
ggttggcaatgggttgctggatgcggtgttgatgccgctccttattttcgactctttaac
ccagtcgttcaaagtgaaaagtttgacccacaaggtcactatattcgacaatggttgcct
gaattagcgccgctgccaaaccaactaattcatgccccctgggatgcagccggtaaaata
aagcaacaatttccaacgctagcagcaaactatccgcttcatgatcctaatctcaagcaa
gttcgattggatcatcaacaacgcgttcaggcacttaaaatgatgaccaatgcatga
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