Thiomicrospira cyclica: Thicy_0245
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Entry
Thicy_0245 CDS
T01517
Name
(GenBank) ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00730
Thiamine metabolism
tcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Thicy_0245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcy03009
]
Thicy_0245
Enzymes [BR:
tcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Thicy_0245
Ribosome biogenesis [BR:
tcy03009
]
Prokaryotic type
GTPases
Thicy_0245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
GTP_EFTU
nSTAND1
AAA_29
ABC_tran
AAA_23
Dynamin_N
AAA_22
Guanylate_kin
AAA_21
SMC_N
RNA_helicase
AAA_7
SRPRB
IIGP
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEG31021
UniProt:
F6D9Y4
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All DBs
Position
complement(239466..240482)
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AA seq
338 aa
AA seq
DB search
MSKRKLSLQQQRRMTKQRIKTAEQPIEGLSAGLVITNFGQRLLVEAEDGAIHNCAVRQHL
GKLVAGDRVFWEADGESGRGIVSAVSPRYSELTRPGFRGQTRMVAANIDVIGIVAPIEPG
VHPDMIDRYLVAAAQLDIPVALIINKIDLLQTDDAWDNLAEILLPYDEMGIDIITVSAHL
ADGLDDIEQFLNQKTSVFVGPSGAGKSSLINALIPDLAIRTSSLSSATGLGVHTTTNSIL
YHLRCGGDIIDSPGVRRFTPAPCDLSELESYYADFAPYLGQCRFDNCTHQHEPDCAIRQA
VEEGDIAETRFNSFQGMRQAFTDPSKNSGGQKHRDKIK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgtaagctgagtcttcagcaacaacgccgcatgaccaagcaacgcattaaa
acggcagagcaaccgattgaagggctgtcagcaggcctggttattaccaactttggtcag
cgactgttggtagaagccgaagatggcgccatccataattgtgccgttcgccagcaccta
ggcaagctcgtagccggtgatcgcgttttttgggaagccgatggtgaaagtggtcgtggg
attgtcagtgccgtatcacctcgctacagtgaacttaccagacctggttttcgaggtcag
actcggatggttgctgccaatattgatgtgattggcattgtcgcgccaatagagcctggc
gtacaccctgacatgattgaccgctacctcgttgccgccgcgcagttggatattcctgtt
gcgctaatcattaacaaaattgatttacttcagacagatgatgcttgggataacttagct
gaaatcttgcttccctatgatgaaatgggcattgatatcataacggtctcggcacattta
gccgatggcttggatgatattgaacagtttttaaatcaaaaaacatcggtatttgtaggt
ccgtcgggggccggtaaatcctcattaattaatgcactgatccctgacctagctattcgc
acgagctcactatcttcggcgaccggcttgggcgttcataccaccaccaatagcatcttg
taccatctgcgctgcggtggtgacattattgactcacctggcgtccgccgctttacccct
gccccttgtgatctgtcggaacttgagagctattatgccgattttgccccatatttgggg
cagtgtcgttttgacaattgcacccatcaacatgaaccagactgtgcgattcgtcaggcc
gttgaagagggcgacattgctgaaacacgcttcaacagctttcaaggaatgcgccaagcg
tttacagacccatcaaaaaactcaggcggccaaaaacaccgagataaaataaagtaa
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