Thiomicrospira cyclica: Thicy_0422
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Entry
Thicy_0422 CDS
T01517
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
tcy
Thiomicrospira cyclica
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_16
MCM
AAA
AAA_3
AAA_2
AAA_7
HTH_30
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEG31196
UniProt:
F6DAV3
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Position
complement(559896..561278)
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AA seq
460 aa
AA seq
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MNAKTRPELYIVEDDADMANLMAELAKSNGFNVSVFLTAQAAQNAIHLNPPAVVLTDLRL
PDGDGLTILDTARRASLDTQIVLITGYATLQDAVKAFKLGLYDLITKPFDITQVQALLTR
LLAQYQHRNSVLKLQTRLAQLDNTSLEPVCQSPQIKQVYNLVQQVSQMDVPVLIEGETGT
GKGVLAKFIHQHSPRNNGAYFELNCAAVPANLIESELFGHEKGAFTGAVARKLGLLELAD
GGTLLLDEINSMSSDVQAKMLHFLQDQTLVRVGGQSKVQVNVRLIFASNQNLHNLVEEGT
FRQDLYYRINVFPVQLPPLRERPEDIQALAERFLSQFSQKFNKPIERFSDEALEQLQAYH
WPGNIRELENIVQRAVVLAQDKKVESHHLPLELRPLPSHIALTPALSLPDNTSLEELESA
WIQYTLERCQGNKSLAARELGIDNSTLHRKLSKLKITTIN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaaaacacgcccggaactctatattgttgaagatgatgccgatatggccaac
cttatggccgaacttgccaaatcaaatggttttaacgtcagtgtgtttttaaccgcacaa
gccgctcaaaatgccattcaccttaatccgcctgccgtggtcttaactgatttacgctta
cccgatggcgatggtttgaccattctcgatacagcacgacgtgccagtctagacacacag
attgtcttaattactggctatgcgaccctccaggatgccgttaaagcctttaaactcgga
ctttatgatttaatcaccaagccttttgacatcacccaggttcaagcgttactgactcgc
ctactcgcccaataccagcatcgtaatagtgttttaaaactgcaaacccgcctggcacag
ttagataacacctcgcttgaaccggtttgccaaagcccgcaaattaaacaggtctataac
ctagtgcaacaggtcagtcaaatggatgtccccgtgttaattgagggcgaaacagggacg
ggtaagggtgtgctggctaagtttattcatcaacacagtcctcgcaataacggtgcctat
tttgagctcaactgtgccgcggtacccgccaatcttatagagtccgaactctttggccac
gaaaaaggcgccttcacaggggctgttgcccgtaaactcggcttattagaattagccgat
ggtggcacgctactgcttgatgaaatcaacagtatgagcagtgatgtacaagccaagatg
ttgcattttttacaagatcaaacgctggtacgcgtgggtggacaaagcaaagtacaggtt
aatgttcgacttatttttgccagtaaccagaatttacataacctagtcgaggaaggcact
tttcggcaagatttatactatcgcatcaatgtttttccagtgcagttgccgcccttgcgc
gaacgtcccgaagatatccaagcattagcagaacgctttttatcccagtttagtcaaaag
tttaacaagcctattgaacgctttagtgacgaagccctggaacaactccaagcttatcac
tggccgggcaatatacgcgaactggaaaacatcgtgcaacgggcggtagtattggcacaa
gataaaaaagtagaaagccatcatttgccgctagaactgcgaccattacccagccatata
gcgctaacgcccgcattaagcctccctgataataccagccttgaagagctagaatctgcc
tggattcaatacacccttgagcgctgtcagggcaataaatctctagcggcgcgggagctt
ggcattgataattcaactctgcaccgcaagcttagcaagctcaaaataaccacgatcaat
taa
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