Thiomicrospira cyclica: Thicy_0500
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Entry
Thicy_0500 CDS
T01517
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Thicy_0500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_0500
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Thicy_0500
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AEG31273
UniProt:
F6DBG5
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Position
complement(626924..629512)
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AA seq
862 aa
AA seq
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MTNTVSDHVANHTPMMQQYLKIKAEHSDRLVFYRMGDFYELFYDDALKAARLLDITLTQR
GQSAGKPIPMAGIPHHSAEGYLAKLVKLGESIAICEQVGDVSNKGPVERKVVRILTPGTL
TEDSLLEARQDNLLVAWSQQGKQIGISWLDVASGRFEVTAFDNQDDAVNELHRLNPAELI
FAESVTHPDESLSAHSHNLPDWLFQEAAAKRLLLEHFSTRDLSPFGCENAPAKSGAAAAL
LYYAQSMLQQPLHQVTSLQSYQTNEYLTLDAITRRNLEIDSHQQGFQHHTLFHLIDQCQT
AMGSRLLRRWLRQPLRNRTHIRQRLNVVDSLLHSQEYPILQEHLKPIGDLERILSRVALG
SARPRDLSQLSRGLNALPGLLSWAKDWGALDALTAQIDPFHELGDELNRALVANPPLLLR
DGGVFKSGYDEQLDELLALKTQAGDFLTDLETRERERTGLNSLKIGFNRVQGYYIELSKQ
YSDQVPLDYTRRQTLKNAERYITAELKNFETQILSADDRAQARENWLYEQLLGKIQAQLM
VLQQTANALATLDVLANFAAQAMARNYAKPQFREEPGLVIEQGRHPTVEALSHEPFIAND
ADFNEQRRLHIITGPNMGGKSTYMRQTAIITILAHIGCFVPAKQACFGPIDRIFTRIGAS
DDLTSGRSTFMVEMTETAHILRHASNQSLILMDEVGRGTSTFDGLALAWAIGEYLATEVK
GYCLFATHYFELTSLAEQFDNTVNSHLTAVEHQDSIIFLHQVKPGPASQSYGLQVAALAG
VPAVVITQAKARLNELEQPRPALVNPSSLESAVKDHHLQFDLFNNPEPDPIITAIQSLEP
DNLTPKQALELIYQWRSQINKP
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaccgtctcagaccatgtcgccaaccacacgcctatgatgcaacagtatctt
aagatcaaagcagaacattcggatcggctagtgttttatcgcatgggcgatttttacgaa
ttattttatgacgatgccctgaaagcagcgcgtttactcgacattaccctgacccagcgc
ggtcaatcggccggcaagccgatcccaatggccgggattccacatcacagtgccgaaggt
tatttggcgaaacttgtgaaattaggcgagtctattgctatttgtgaacaagtcggtgat
gttagcaacaaaggccctgttgaacgaaaagtcgtgcgaattctaacccctggtactcta
acggaagacagcttgcttgaagcgcgccaagacaacttgctggtcgcctggtcacaacag
ggcaagcagatagggattagctggctagatgtcgctagtggtcgctttgaggtgaccgct
tttgataatcaagacgatgccgtaaatgaattacatcgacttaatcccgccgaattaatt
tttgccgaatcggtcactcaccctgatgaaagtctaagcgcccatagccataacctgcca
gattggttatttcaagaagccgcggccaagcgcttattactagaacattttagcactcgg
gatttaagcccatttggttgcgaaaatgcacccgccaaaagcggtgccgctgcggctcta
ctctattatgcacaatccatgttgcaacaacccttgcatcaagtaaccagcttgcaaagt
tatcaaacaaacgagtatttgacgctggatgctattacacgccgcaatctagaaatagat
agtcatcaacaaggttttcagcatcacacgctatttcatttaattgaccaatgtcaaaca
gcgatgggcagccgattattgcggcgctggttacgccaacctttacgcaatcgaactcac
attcggcaaagattgaatgtggttgacagtttactccacagccaagagtaccccatttta
caagaacacttaaagccaattggcgatctagaacgtattttaagccgtgttgctttaggc
agtgctcgtccgcgtgacctgagccaacttagccgtgggctaaacgcgctaccaggcctg
ctaagctgggcaaaagactggggggccttagatgcattaacggctcaaattgaccctttt
cacgaattaggcgacgaacttaaccgcgccttagtagcaaacccgcctttattattgcgc
gatgggggtgtttttaaatccggttatgatgaacagctggatgaattattggcgctaaaa
actcaagcgggtgattttttaaccgatttagagactcgcgaacgcgagcgcaccggctta
aacagcttaaaaatcggctttaatcgggtgcaaggctattacattgaattaagtaaacaa
tatagtgatcaagtaccattagattatacgcggcgccaaactttaaaaaatgccgaacgt
tacatcaccgctgaattaaaaaactttgaaacccagattctcagtgccgatgatcgtgct
caagcccgtgaaaattggctctacgaacaactccttggcaagattcaagcgcaattaatg
gtcttacagcaaacggcaaatgcgctagcaacccttgatgtattagccaattttgcggca
caagctatggcacgcaactacgctaaaccccagtttcgtgaggaaccaggcctggttatt
gagcaagggcgacatccaacagtagaagccctgtctcatgaaccctttattgccaatgat
gctgactttaatgaacaacgccgtttacacattattaccggtcccaacatgggcggtaaa
tcgacctatatgcgccaaacagcgattattaccattcttgcacatatcggttgtttcgtg
cccgccaagcaggcctgtttcggtccaattgatcgtatttttacccgcataggcgcatcc
gatgatttaacgtcggggcgatcaaccttcatggttgagatgacagaaaccgcgcatata
ttacgccatgctagtaaccaatcactgattctaatggatgaggtaggccgcggcacctct
acatttgacggacttgctctcgcttgggcaattggcgaatacttggctactgaggttaaa
ggttattgtttatttgcaacccattattttgaactgaccagtcttgcagagcaatttgac
aacaccgttaatagtcatttaaccgccgttgagcaccaagacagtattatttttttacat
caagtcaaaccgggtccagcatcacaaagctatggcttacaagttgccgccttggccggg
gttcccgcggtggtgattacccaagccaaagcgcgcttaaacgaactcgagcaaccaaga
cccgccttggtaaacccatcgagccttgaaagtgccgttaaggatcatcatctgcagttt
gacctctttaataacccagaacctgaccccataataacggctatacaaagccttgagccg
gataacctaacgcctaaacaagcgcttgaactgatttatcaatggcgtagtcagattaac
aagccttaa
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