Thiomicrospira cyclica: Thicy_0508
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Entry
Thicy_0508 CDS
T01517
Name
(GenBank) cell wall hydrolase/autolysin
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Thicy_0508
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tcy01011
]
Thicy_0508
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcy03036
]
Thicy_0508
Enzymes [BR:
tcy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Thicy_0508
Peptidoglycan biosynthesis and degradation proteins [BR:
tcy01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Thicy_0508
Chromosome and associated proteins [BR:
tcy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Thicy_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
AMIN
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM1_NFP_LYK
LysM_RLK
AMIN-like
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
AEG31281
UniProt:
F6DBP5
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Position
638212..639912
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AA seq
566 aa
AA seq
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MYLTKTTQFKSACKLCLQSIFTLVLLLTSQVAIAAEVNSIRLGQTPDQTRVVFEMANTDV
YRVMHLEDPPRIVIDFPGAQSNVSFRNQRFQDPRLSGIRMATDVQRTRVVLDLSAGYEYR
HFVLAKTEQRPQRLVVDISTHVRQAPTLAETVIAQAAPPPATRPQATDVASVEADNPVQV
APQPVPVRPTPVATQPAPAQPAVAQPAVRDTLQQHNRMAKEFVIAIDPGHGGNDVGAIGP
SGVYEKDVVLAIAKKLKEEIDRQPGMRAILTRDRDVYVGLDERARIARGQQADLFVSIHA
DAYTSPQPRGGSVYVLSQRGASSAMARAVAERENEALGIVTLAGRDQDVAFVLSDFSRES
SLQASRKLGGQVLNVMSGNGLHLHKSTVQAANFAVLRSIDMPAILVEAAFISNPEDERLL
VNPRFQRQFAQSLTIGLQAFLEESGHKPNWGEPLFVRHQIQRGDNLSTIADIYGVSSREL
MRLNGLRNPNQLVVGRSLRIPITDKMTVHYHRTYRVQPGDTLSLIAQRHGVTVPQVMQMN
NLTNANQLRVGTELRIPIRQQMLAAS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaacaaagactacgcaattcaaatcagcctgtaagctgtgcctacaatcgatt
tttacgttggttttgttgctaacaagtcaggtagcgattgcggcagaggtaaacagtatt
cggcttggtcaaacacccgatcaaacacgcgtggtgtttgaaatggcaaataccgacgtt
taccgagttatgcatttagaggacccgccacgaattgttatcgattttcctggggctcaa
agcaatgtgagtttccgtaatcaacgttttcaagacccgcgtctatccggtattcgcatg
gcaactgatgtgcagcgtactcgggttgttttggatttgtcggcaggttatgagtatcgc
catttcgtgttggccaaaacagaacagcgtcctcagcgccttgttgtagatattagtacc
catgtccgccaagcaccaactttagcagagacagtaattgcgcaagcagccccgccacca
gctacgcgcccacaagcgactgatgtagcctctgtggaggctgataatccggtgcaagtg
gcaccgcagcctgtgccggttcgtccgactccggttgcaacgcaacctgcgccagcgcaa
cccgcagtggcccagccggctgttcgagataccttgcaacagcataatagaatggctaaa
gagtttgttattgctatagatccaggacatggtggtaatgacgttggtgctattggtccg
tcaggtgtttatgaaaaagacgttgttttagcgatagctaaaaagttaaaagaagaaatt
gatcgtcaacctggcatgcgtgccattttaactcgtgaccgagatgtgtatgtaggtttg
gatgaacgtgcacgtattgcccgtggccagcaagcggatctgtttgtatccattcatgct
gatgcttataccagccctcagccaaggggtggttcagtttatgtattgtcacagcgtgga
gcctcaagtgctatggcgcgcgctgttgcagaacgtgagaacgaagcattagggattgta
actttagctggtcgcgatcaagatgttgcgtttgttttgagtgatttttcgcgtgaatcc
agtttgcaagccagccgtaaactgggtggccaagttcttaatgtgatgtctggtaatggc
ctacacttgcacaaatctaccgttcaagcggcgaattttgcagttttgcgctcgattgat
atgcccgctattttggtcgaagccgcttttatatccaaccctgaagatgaacgactgctg
gttaatccgagattccaacgccagttcgcgcaatcgctaacgattggactgcaggcattt
ttagaggaatcagggcataagcccaattggggagagcctttgtttgtgcgtcatcaaatt
caacgcggtgacaatctatcaaccattgccgatatctatggtgtatcttcgcgagaatta
atgcggttaaatggcttgcgtaaccctaatcaattggtggtagggcgtagcttgcgtatt
cctattactgacaagatgactgttcattatcaccgtacctatcgggttcagcctggagac
acgctgtctctaatagcccagcgtcatggtgtaaccgttcctcaggttatgcagatgaac
aaccttaccaatgctaatcaacttcgcgtcggtacggagttacgcattccgattcgtcaa
caaatgttggccgctagttaa
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