Thiomicrospira cyclica: Thicy_0561
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Entry
Thicy_0561 CDS
T01517
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy03030
DNA replication
tcy03430
Mismatch repair
tcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thicy_0561
03430 Mismatch repair
Thicy_0561
03440 Homologous recombination
Thicy_0561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcy03032
]
Thicy_0561
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_0561
Enzymes [BR:
tcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thicy_0561
DNA replication proteins [BR:
tcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thicy_0561
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thicy_0561
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEG31333
UniProt:
F6DBU7
LinkDB
All DBs
Position
complement(704950..705654)
Genome browser
AA seq
234 aa
AA seq
DB search
MRQIILDTETTGIDPKKGHRIIEIGAVEVIDRRVTGSYYHQYIHPEREVEKEAINVHGIT
NEFLKDKPVFSAIVDEFMAFVTGAELIIHNAPFDVGFINHELNLLKPNTRGIIEDYCKIT
DTLKMARRMYPGQRASLDALCKRLMVDNSNRTLHGALLDAEILADVYLLMTGGQVSLSLK
NQQDAASAAAQTRLTNPAEAQTQLRIITPSDEELAAHRDYLTQLAKETNTEIRW
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagattatcctcgacacagaaaccaccggtatcgaccctaaaaaaggccaccgc
attattgaaattggtgcggtggaagtgattgatcgccgcgttaccggtagctactatcat
cagtatattcatccagaacgagaggtcgaaaaagaagccattaacgtgcatggcatcacc
aatgaatttttaaaagacaaaccggtatttagcgcaattgttgacgaatttatggcattt
gtaacaggcgccgaactaatcattcacaacgcgcccttcgatgttggcttcattaaccac
gaactcaacctgttaaaaccgaatactcggggcattattgaagactactgtaaaatcacc
gatacccttaaaatggcgcggcgaatgtatcccggtcaacgcgcatcattagatgccttg
tgcaaacgcttaatggttgataacagtaaccgcaccctgcatggcgcgttgttagatgcc
gaaatcttagctgatgtctatttattgatgaccggcggccaagttagccttagccttaaa
aatcaacaagacgccgctagcgcagccgcacagacgcggctcacaaaccctgccgaggcc
caaacccaactacgcattatcaccccgtctgacgaagagctggccgcacaccgtgactat
ttgacccagctggccaaagaaactaatacggagattcgctggtaa
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