Thiomicrospira cyclica: Thicy_0603
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Entry
Thicy_0603 CDS
T01517
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcy03019
]
Thicy_0603
03009 Ribosome biogenesis [BR:
tcy03009
]
Thicy_0603
Messenger RNA biogenesis [BR:
tcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Thicy_0603
Ribosome biogenesis [BR:
tcy03009
]
Prokaryotic type
rRNA processing factors
Thicy_0603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
SMMA_C
Motif
Other DBs
NCBI-ProteinID:
AEG31375
UniProt:
F6DBY9
LinkDB
All DBs
Position
741860..743332
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AA seq
490 aa
AA seq
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MNDEQKVLVNITPNETRVAWLENGVLQEIWVERNKKRGLVGNIYLGRIDRVLPGMQAAFV
DIGLARAAFLHVSDVTQGLISQRSPEDPEDIGRLLFEGQRVLVQVVKDPLGTKGARVTMQ
VSIASRLLVYMPDEQGIGVSQKIDASVERERLREVIKLIPEASSSSGGFIVRTVAEGADF
HELRADVLFLQKLWEQASQKVGESKKPRLLYEDLPLYLRILRDVPNDGIEKIRVDSAETF
QKMKVFAKMYSLEVTDKIGHYKGDRPIFDLYNIEEEIQTALEKKVMLKSGGYLIIDQTEA
MTTIDVNTGGFVGHKNLEETIYRTNLEATQAIARQVRLRNLGGIIILDLIDMEDDEHKRH
VYESLQKALTLDRVKTTISEISRLGLIEMTRKRTRESLERTLCEPCPMCHGRGVVKTAET
VGYEIFREITRMDKSFNAERYRVIAAESVVGRILDEESDAVAALEAFLGKTIKFQAESSY
PPEYFDVVMM
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaacaaaaagtcctagttaacattacgccaaatgaaactcgtgtggcatgg
ttggaaaatggcgttctgcaggaaatttgggttgagcgcaataaaaagcgcggcttggtg
ggtaatatttacctagggcggatcgaccgtgtattgcctggtatgcaggctgcatttgtc
gatattggcttggcgcgtgcagcatttttgcatgtgtccgatgttacccagggtttgatt
agtcaacgcagtccggaggaccctgaagatataggtcgccttttatttgagggtcagcgt
gtgttagtgcaagtggtaaaagatccgctcggcaccaagggtgcacgtgtgaccatgcag
gtatccattgcatcacgattgctggtatatatgccagatgagcaaggtattggtgtttcg
caaaaaattgatgcctcggttgagcgcgaacgcctccgtgaagttataaagttaattcct
gaagcctcgtcatcgtcgggtggttttatcgttagaacggtggcagaaggtgctgacttt
catgagctgcgtgctgatgtgttatttctgcaaaaattatgggagcaagcgagtcaaaag
gtgggcgagtcaaaaaaaccgcgtctactttatgaagacttgccactttatttgcgcatc
ctacgagatgttcccaatgatggaattgaaaaaattcgtgtcgattcagcggaaaccttt
cagaagatgaaagtttttgccaagatgtactctttagaggtgacagataagattgggcac
tacaagggtgatcgccctattttcgacttatataatatagaagaagagattcaaacggca
ttagaaaaaaaagtcatgctcaaatcaggtggttatctgattattgatcaaactgaagcg
atgactacaattgatgttaataccgggggctttgttgggcataagaatctagaggaaacg
atctatcgtactaatcttgaagcaacgcaagcaatagcgcgacaagtgcgtttacgtaat
ctgggcggtattattattctcgatctcattgacatggaggatgatgagcataagcgccat
gtttatgaaagcttgcagaaagcattaactctagatagagtcaaaacaactatcagtgaa
atatctcgactgggtctgattgaaatgacgcgaaagcgaacacgcgaatcacttgagcgg
acactatgcgaaccttgtcctatgtgccatgggcgcggggttgttaagacagctgagacg
gttggttatgaaatttttcgagagattactcgtatggataagtcgtttaatgccgagcgt
tatcgtgtaatagcagctgagagcgttgtgggtagaatccttgatgaagagtcagatgct
gttgccgcattggaggcttttttgggaaaaactatcaagtttcaagcagaaagcagttat
ccacccgaatattttgatgtggttatgatgtaa
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