Thiomicrospira cyclica: Thicy_0621
Help
Entry
Thicy_0621 CDS
T01517
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcy03016
]
Thicy_0621
Enzymes [BR:
tcy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Thicy_0621
Transfer RNA biogenesis [BR:
tcy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thicy_0621
Prokaryotic type
Thicy_0621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEG31393
UniProt:
F6DC07
LinkDB
All DBs
Position
765833..766615
Genome browser
AA seq
260 aa
AA seq
DB search
MHRWALGIEYVGTAYCGWQRQGHCDSVQGQLEKALSTIAQETIDVHCAGRTDAGVHGLGQ
VVHFDTQSIRPHSAWVQGANTQLPRDIRVTWAHQVDEGFHARFSAQARQYRYVIYNRAQP
SALLYGRTYWERHPLDAKAMNIAGQALLGEQDFSSFRAAQCQAQHGQRNIQLLCVSRRED
FVHIDIKANAFVHHMVRNIAGTLMQIGRGDKPISWAGELLALKDRTQAYATAPAEGLYFV
KAFYPESFSLPQLAVNEVLW
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgttgggccttgggtattgaatatgtggggactgcctattgtggttggcaacgc
caaggtcattgtgattctgtgcaaggccaactagaaaaggcgctgtccaccattgctcaa
gagacaatagacgtccattgcgctggtcgtactgatgcgggagtgcatgggttggggcaa
gtggttcattttgatacccagtccattcggccacattcagcttgggtgcagggggcaaat
acacaactccccagagatatacgcgtgacttgggcgcatcaagttgatgagggctttcat
gcacggtttagtgcccaagctcgtcagtatcgttatgtgatttataatcgtgcgcaacca
agtgctttgctttatggtcgaacctactgggagcgtcatcccttagatgcaaaggcaatg
aatattgcaggccaggcacttttgggtgaacaggattttagctcattccgtgcggcacaa
tgtcaggctcagcatggacaacgaaacattcagttattgtgtgtgagtcggcgagaggat
tttgtccatattgatattaaagccaatgcatttgtgcatcatatggtcagaaatattgcc
ggcacactcatgcaaattggccgtggagacaagcccataagctgggcaggtgagttattg
gctttgaaagatcgaactcaagcctatgcgactgctcctgcagaaggcttatatttcgtt
aaagctttttatccggagtctttttctttaccgcaattagcggttaatgaggtgttatgg
taa
DBGET
integrated database retrieval system
