Thiomicrospira cyclica: Thicy_0863
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Entry
Thicy_0863 CDS
T01517
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcy03016
]
Thicy_0863
Enzymes [BR:
tcy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Thicy_0863
Transfer RNA biogenesis [BR:
tcy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thicy_0863
Prokaryotic type
Thicy_0863
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AEG31635
UniProt:
F6DCP9
LinkDB
All DBs
Position
complement(1018039..1018995)
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AA seq
318 aa
AA seq
DB search
MSQTRQRRRVVNGIVLVDKPAGMTSTEVVKRVIKAYRAKKAGHSGTLDPFATGLLPVCLG
EATKVSSMLLASDKRYIAILDLGQKTDTGDRDGEVIETLPVPELTAQSIEQVLQSFRGEI
AQIPPMYSSIKFEGKSLHVYARKGIEIEREPRNVTIHELTLLNFSAHQIRFEVHCSKGTY
IRVLGAEIAEALGTLGHLTALHRTQTGVFNAQDMQPLHEICTYPNSSIHPLDIALLEYPA
LYLTAEQKEHLWLGGFLFDVLPAQTDVTHMIRLYDDKGMIFAMGEWQADKQRLKIKRGFH
LNPDDPNALCATQPRLDR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagacgcgtcagcgacgccgtgtcgtgaatggcattgtattggtggataagccg
gcaggcatgacttctacggaagtggtcaagcgagtgattaaagcctatcgcgcgaaaaag
gcaggtcactctgggacgctagatcctttcgctaccggtttattacctgtctgtttgggt
gaggcgaccaaggtatcgagtatgttgttggcttcagataaacgttacattgcaatactg
gatttaggtcaaaaaaccgataccggtgaccgcgatggtgaggtgattgaaaccttgcct
gttcctgaactaaccgcccagtcaatagaacaggtgctacagtcttttcgtggcgagatt
gcccaaatcccaccgatgtattcatcgattaagtttgaaggcaaatccttgcatgtctat
gctcgtaaggggattgaaattgagcgtgaaccgcgcaatgtgacgatccatgagttaaca
ctactgaatttttcagcgcatcaaattcgctttgaagtgcattgctctaaagggacatac
attcgtgtattaggcgccgaaattgccgaggctttggggacgctaggccatttaacggcc
ttgcaccgtactcaaacgggcgtttttaatgctcaggatatgcaacctttgcatgagata
tgcacctacccgaattcctcgatccaccctctggatattgcgttattggaataccccgca
ctctacttaactgctgaacaaaaagagcatctgtggttaggtggttttttgtttgatgtt
ttgcctgcacaaacggatgttacccatatgattcggttatatgatgataaggggatgatt
tttgcgatgggtgagtggcaggctgataagcagcgtttaaaaattaagcgtggctttcat
ttaaatccggatgatccgaatgcgctctgtgccacacaacctcgcttggaccgctga
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