Thiomicrospira cyclica: Thicy_0868
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Entry
Thicy_0868 CDS
T01517
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy03030
DNA replication
tcy03430
Mismatch repair
tcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thicy_0868
03430 Mismatch repair
Thicy_0868
03440 Homologous recombination
Thicy_0868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcy03032
]
Thicy_0868
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_0868
Enzymes [BR:
tcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thicy_0868
DNA replication proteins [BR:
tcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thicy_0868
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thicy_0868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEG31640
UniProt:
F6DCQ4
LinkDB
All DBs
Position
complement(1024041..1024673)
Genome browser
AA seq
210 aa
AA seq
DB search
MVLSSLRQSLHQAWLKWQLRDPAYDFLFAPEPDQEVVCFDCETTGLDPAKDKIVTLSAIK
IRGREILTSESLNLQFKQQRDINPESILIHQLRNMDVTLGLDEREAIEQFLVFIGSRPLV
GYYLSFDVSMVNAIIKPWLGIPLPNRQLDVAELYHQQFYQDWLQPDHEVFDLSFKTLLSK
LNLPTLGQHDAFNDALMTAMIYVRLQANLD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggtgctttcttcattacgacagagtctgcaccaggcctggctaaagtggcaattgcgc
gaccctgcttatgattttttatttgcccctgagccagatcaagaggtggtgtgttttgac
tgtgaaaccacaggattagatcctgccaaagataagattgtgaccttgagcgcgattaag
attcgtggtcgggaaattttaaccagtgagagtttgaatctacagtttaaacaacagcgc
gatattaaccctgaaagcatcctgattcatcagttgcgcaatatggatgtcactttagga
cttgatgagcgcgaagcgattgaacagtttttggtctttattggttctcgccctttagtt
ggttattacttatcctttgatgtcagtatggttaacgcgattataaaaccctggttgggc
attcccttgcccaatcggcaattggacgtggcggaattgtatcatcagcagttttaccag
gattggttgcaaccggaccatgaagtatttgatctgagctttaaaactttgttgtctaag
ttaaatttgccaacactgggccagcatgatgcgtttaacgacgcgttaatgacagcaatg
atttatgtcagattgcaagcgaatcttgattag
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