Thiomicrospira cyclica: Thicy_0949
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Entry
Thicy_0949 CDS
T01517
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Thicy_0949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcy02000
]
Thicy_0949
Enzymes [BR:
tcy01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Thicy_0949
Transporters [BR:
tcy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Thicy_0949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_25
ABC_ATPase
AAA_22
Lactamase_B_5
AAA_30
AAA_21
AAA
DEAD
MMR_HSR1
nSTAND1
nSTAND3
Spore_III_AF
DUF87
AAA_28
AAA_33
NACHT
AAA_5
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEG31716
UniProt:
F6DCY0
LinkDB
All DBs
Position
1094357..1096096
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AA seq
579 aa
AA seq
DB search
MYDRQSLKLYGQLLRYILPYKSAIALTLFSLVLIALLEPATAYVLKDLVDVGLIEQDPNS
FVILPFLLALVFIFKGVFEYISKVVSQWISERATLQIRLEMFEKLQFMTLKSFQDTTSGH
LMSKITHNVSQTSQALVNAWVVLIRDTLMIIALLAYMLYVSWELTLLMLVIAPVVAFLIN
KASQLMRKYSRKSQENMGAVTQQLEESIHAHKDIKVYGAEQYEIERFNQVLAKQMQYNVK
QVRVAALNVPLVQVIAAIALSFVVYFAMKLAADGAFTPGELVSFILAMALTFDPIRRLTS
VNITLQKGLAAAESIFEFLAITNETNTGTQQPPIKGELQLNNLVFQYDRAEQPTLKGIQL
TIPANQTTALVGASGSGKSTLVNLIARFYAPTSGDILLDNTPLADIELDYLRQHIAFVSQ
HVVLFNDSIRANIAYGHDEFDEAAIIQAAKDAHAWEFIEKLPDGLDTMIGDNGALLSGGQ
RQRLAIARAFLKNAPILILDEATSALDNQSEAMIQQAMAKLRQNRTVIIIAHRLSTIEQA
DQIAVLDQGELVELGTHRDLLAQQGAYARLQQQGELGSG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatagacaatcattaaaactctatggccaattactccgctacatcttgccttac
aagagcgccattgccttaaccctgtttagcttggtattgattgcgcttttggaaccagcc
acagcctatgtgctcaaagatctggtcgatgtcggcttaattgagcaagacccaaatagt
tttgtgattttgccctttctgttagccttagtgtttatttttaagggtgtgtttgaatac
atcagcaaggtagtgagccaatggattagtgaacgcgccaccttgcaaattcgtttagaa
atgtttgaaaaactgcagtttatgaccttaaagagttttcaggacacaacctctggtcac
cttatgtcaaaaatcacccacaatgtatcgcaaaccagtcaagcactggtaaatgcttgg
gtggttttaattcgcgatacgctgatgattatcgccctactcgcctatatgctttatgtg
tcctgggagctaaccctattaatgctggttattgcgccggtggtggcttttttgattaat
aaagccagtcaattgatgcgtaaatacagtcgaaaatcgcaagaaaatatgggtgcggtg
acacaacaactggaagagagcattcatgcccataaagatattaaagtttatggcgctgaa
cagtatgagattgagcgttttaatcaagtgctggcgaaacaaatgcaatacaacgtaaaa
caggttcgagttgcagcactcaatgtacccctagtgcaagttattgcggccatcgccctg
tcttttgtagtgtactttgccatgaagctggccgcagatggggcctttaccccgggcgag
ttagtatcttttattttggcaatggcgttaacctttgaccccattcgtcgcctaactagt
gtcaatatcaccttgcagaaaggtttggcggccgcagaaagtatttttgaatttttagcg
attacgaatgaaaccaacaccggcacccagcaaccacctattaaaggtgaactacagctt
aacaatttggtttttcagtatgatcgcgctgagcaaccgacccttaaagggattcaatta
accatcccggctaaccaaaccaccgccttggtgggggcttcgggcagtggaaaaagtacc
ctagtcaatctgattgcccgcttttatgcaccgaccagcggtgacattttattagataac
acccccttggctgatattgagctggattatttgcgccagcatattgcttttgtgagccag
catgtggtgctgtttaatgattcgattcgggctaacattgcctacggccatgatgagttt
gatgaagcggcgattatccaagccgctaaggatgcccatgcctgggagtttattgaaaaa
ctgccggatggtttggatacgatgattggtgataatggcgccctgctgtcgggcggtcaa
cggcaacgcttggcgattgcgcgagcctttttgaaaaatgcgccgattttgattttggat
gaagcgacatccgcattggataatcaaagcgaggcgatgattcaacaggcgatggccaaa
ttacgccagaaccgtacggtgattattatcgcgcatcgcttaagcaccattgaacaggcg
gatcaaattgcggtgttggatcaaggtgaactggttgaattaggcacgcatcgtgactta
ctggcacaacaaggtgcttacgccaggttacagcaacagggtgaacttggcagtgggtga
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