Thiomicrospira cyclica: Thicy_1023
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Entry
Thicy_1023 CDS
T01517
Name
(GenBank) Crossover junction endodeoxyribonuclease ruvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thicy_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_1023
Enzymes [BR:
tcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Thicy_1023
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thicy_1023
RecFOR pathway proteins
Thicy_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
RuvX
Motif
Other DBs
NCBI-ProteinID:
AEG31790
UniProt:
F6D8D9
LinkDB
All DBs
Position
complement(1172565..1173095)
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AA seq
176 aa
AA seq
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MANLRPSQRILGIDPGSRKTGFGVIESGRYHPKYLASGVIRVEKFTGTERLTRIFQSIGE
LIERYDPHFVVVEKVFVHKNPSSAIKLGQARGVILCAAALQSRAIIEYTPTQIKSTIVGQ
GHAGKDAVQFMVKQLLRLTEVPQEDAADALACALCHDRYLTLGIDPASLSKGTHFK
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaccttcggcccagtcaacgtatattgggcatcgatccagggtcacggaaaaca
ggctttggggttatcgagtcgggtcgctatcatcctaaatatttggccagcggcgttatt
cgagttgaaaaatttactggtactgagcgactcactcgtattttccagtcgattggtgaa
ttgatcgagcgctatgatccacattttgttgtggttgaaaaagtctttgtgcataaaaac
cccagttcagcgattaaattagggcaagcgcgtggcgtcattttgtgtgcggccgcatta
cagtcacgcgcgattattgaatatacgccgacacaaataaaaagcacgattgtggggcaa
ggccatgctggaaaggatgccgttcaatttatggtcaagcagttgttgcggctaacggaa
gttcctcaagaagatgcggccgatgctttggcttgtgctttgtgtcatgaccgttattta
acgctgggtattgacccggcaagtttatcgaaaggcacgcattttaaataa
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