KEGG   Thiomicrospira cyclica: Thicy_1040
Entry
Thicy_1040        CDS       T01517                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
tcy  Thiomicrospira cyclica
Pathway
tcy00740  Riboflavin metabolism
tcy01100  Metabolic pathways
tcy01110  Biosynthesis of secondary metabolites
tcy01240  Biosynthesis of cofactors
tcy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:tcy00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Thicy_1040
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Thicy_1040
Enzymes [BR:tcy01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Thicy_1040
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Thicy_1040
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD KR
Other DBs
NCBI-ProteinID: AEG31807
UniProt: F6D8F6
LinkDB
Position
complement(1186150..1187310)
AA seq 386 aa
MLSSYPHSLTDSIWMNRALDLASLGRLSTRPNPAVGCVLIKEGQLIGEGWHQRAGEPHAE
VLALRMAGDRARGATAYVTLEPCSHFGKTPPCCNALITAGIKRVVIAMIDPNPRVSGRGI
AALQESGIEVTQGVAMKRAQQLNKGFVSRMQRGRPNVSLKLATSVDAKVALANGQSQWIT
NALARAQGHLLRAQQCAIITGIASVITDDPRLTVRLDDSAFYAQGWSSAGRVEPMKVVVD
SRLRIPLNAKLCQQADALIIYTTRATLCAQADKVAQLAAKGIKVHGVDCDPQHRVNLVSV
LAHLASHYQCNNVMLESGGVLAGAMLSIDCVDEIHWFSAPLVLGQDAQSCFVTQTLTQLS
QAPRLKLVEQTMLGDNIYSRYQLEKE
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgctaagctcatatcctcattcgctcacggattcaatttggatgaatcgtgcgctggat
cttgcaagtcttggtcgcttatcaacccgtcctaatccagctgtcggttgtgttttaatc
aaagaaggccagctgattggagagggctggcatcagcgtgccggtgagcctcatgctgaa
gtgttagctcttcgcatggccggtgatagagcacgtggtgccacagcctatgtaacccta
gagccctgctcgcattttggaaaaacaccgccttgttgcaatgcactcattacagccggt
attaaacgggtggtaattgctatgatcgatcccaatccacgggtttctgggcgcggtatt
gcagcacttcaggagtcaggcattgaggtcacccaaggcgtggcaatgaaacgagcacaa
caacttaacaaaggctttgtcagccggatgcaacgagggcggcctaatgttagtttaaag
ttagccacgagtgttgatgcgaaggtggccttagctaacggtcaaagccaatggattacc
aatgcactagcaagggcgcaaggtcatctattacgcgcgcagcaatgtgccattatcacc
gggattgctagtgttatcactgatgatcctcgattaacggtgcgacttgatgattcggcg
ttttatgctcagggctggtcaagtgccggtcgtgttgaaccgatgaaggtcgtggtagat
agtcggttgcgtatacctttgaatgcgaagctctgtcagcaagcggacgctttgataatt
tatacaaccagggcaacgttatgcgcccaagccgataaggttgcgcagcttgcggcaaag
ggtattaaagttcatggggttgattgtgacccgcaacatagagttaacttggtgtcggtg
ctagcgcatttagcatcacactatcagtgtaataatgtcatgcttgagtccggaggggtt
ttagctggtgcgatgctttccattgattgtgttgacgagattcattggtttagtgcacct
ttggtgttggggcaggacgcacagagttgtttcgttacccaaaccttaacgcaactgtct
caagccccacgtttaaaactggtcgaacagacaatgttgggcgataatatatactcgcgt
tatcaattggaaaaggaatag

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