Thiomicrospira cyclica: Thicy_1168
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Entry
Thicy_1168 CDS
T01517
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tcy02044
]
Thicy_1168
02035 Bacterial motility proteins [BR:
tcy02035
]
Thicy_1168
Secretion system [BR:
tcy02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Thicy_1168
Bacterial motility proteins [BR:
tcy02035
]
Pilus system
Pilus assembly proteins
Thicy_1168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_16
AAA_30
AAA_29
FtsK_SpoIIIE
AAA_7
AAA_23
ABC_tran
AAA_14
nSTAND3
SRP54
AAA
AAA_5
Toprim_4
AAA_11
MobB
AAA_19
DEAD
AAA_33
cobW
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEG31935
UniProt:
F6D8T5
LinkDB
All DBs
Position
complement(1324284..1325813)
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AA seq
509 aa
AA seq
DB search
MGVSERMEREYLLDQRVLNEAQLVLAEQAQQLQGGSLLENTVKLGFLTREAANNYYGKQL
GLSYLSLTSLVADPDALALFEPSLLRKWQAAPIRMQQQTLTLGVVNPEDLWVQDQIEHYC
ASNLPSFQISWVLINADELPDFLARSYQYERKISALMTEALELSPQQASLNDQDDFRHPI
VRLVDSVFIEAIKLGASDLHFEPEQAFVQLRYRIDGLLALQHYIPRALWLAILARIKILS
GLDVTEQRRPQDGRFAMMLMGKPVDFRVSSLPGAQGENLVLRVLDQQKSVLDLAALGLDD
LREKSLRRWLAQPAGVILVVGPTGSGKTTSLYAMLSSLNQPGVNIMTLEDPIEYRLVGLR
QTQVNTEFGVSFQSGLRAILRQDPDIILVGEIRDAETARLAFQAAMTGHLVLSTLHCDRA
TQAQHRLVDLGVSDTVINECLLGVMAQRLVRRLVPETGSYKGRQAIIEMLSRWPADVELG
DFFDHGRELVANAITDKAELQRVLGGDDA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgttagtgaacgaatggagcgggagtatctattagatcagcgcgttcttaatgag
gcgcaactggttttagctgagcaagcccagcagcttcagggtggcagtttgctcgagaat
accgttaagctaggttttttaacgcgtgaggcagccaataactattatggtaagcaactg
ggtttaagctatttatccttaaccagcttagttgctgatccagacgctttggcgttattt
gagccgagtttgcttcgtaaatggcaagcggcacctattcgcatgcaacagcaaaccctt
accctgggtgttgtgaatccggaagacctatgggtacaggatcaaatcgagcactattgt
gcctcaaacttgccgtcctttcagatcagttgggtgttaattaatgcagatgagttacca
gattttcttgctcgatcttatcagtatgaacgcaaaatatcggcattgatgacagaggca
ttggaattaagtcctcagcaagcaagtttaaatgatcaggatgattttcggcatccaatt
gtgcgcttggttgatagtgttttcattgaagcaatcaagctcggggcttctgacctgcac
tttgaacctgagcaagcctttgtccaactgcgatatcgtattgatggattattggcgctt
caacattacattcctcgagccttgtggttggcgatattggcacgtattaaaattttgagt
ggcttggatgtaacagagcaaagacgtcctcaagatggtcgatttgcgatgatgttgatg
gggaagccggttgattttcgggtcagtagcttgccgggtgcacagggcgaaaatttggtg
ctgagggtgctggatcagcaaaaaagtgtcttggatcttgcggcgttaggacttgatgat
cttcgtgaaaaatcgttaaggcgttggttagctcagccagcgggagttatcctggtcgtt
ggaccaacgggttcgggaaaaactaccagtttatatgcgatgttatcaagtcttaatcag
cccggagtcaatattatgaccctggaagatcctatcgaatatcggttagtcgggttacgt
caaacccaggttaatacggagtttggggttagctttcaaagtggtttacgcgctattctt
cggcaggaccctgatattatcttagtcggtgaaattcgtgatgcagagaccgcacgtctg
gcgtttcaggcggctatgacgggacacttggtgttatcaacactccattgtgatcgagcc
actcaagcacaacatcgtttagtcgatttgggcgtcagtgatacggtgattaatgagtgc
ttgcttggcgttatggcgcaacgcttggtacgccgactcgttcctgaaacgggaagctat
aaggggcgccaagcgataattgaaatgctatcgcgctggccagccgatgtcgagttgggt
gacttttttgaccatggtcgagagcttgtcgcaaacgccattactgataaggctgagttg
cagcgcgtattaggtggtgatgatgcctag
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