Thiomicrospira cyclica: Thicy_1424
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Entry
Thicy_1424 CDS
T01517
Name
(GenBank) Phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Thicy_1424
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcy01007
]
Thicy_1424
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcy03016
]
Thicy_1424
Enzymes [BR:
tcy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Thicy_1424
Amino acid related enzymes [BR:
tcy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Thicy_1424
Transfer RNA biogenesis [BR:
tcy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Thicy_1424
Prokaryotic type
Thicy_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
PhetRS_B1
MinC_N_1
Motif
Other DBs
NCBI-ProteinID:
AEG32184
UniProt:
F6DA53
LinkDB
All DBs
Position
complement(1610107..1612482)
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AA seq
791 aa
AA seq
DB search
MKVSEQWLRTWCNPNWTTQELSEALSLAGLEVDDITAVAPAFSGVVVAEVVRVDAHPDAE
KLRVAQVNVGEEALVQIVCGAPNVRPGIKVPCAKVGAVLPDSFKIKKAKLRGVESFGMLC
SATELGLEQDYDGLWELSADLTVGEDIRQALALDDQLIEVDLTPNRADCLSVEGLARELA
VVSDAPFQQPFELSPLTLSGNCPQSVEILDSQACLTYLGCVVTDYNAQASTPDWMVQRLI
RSGLRPISLLVDITNYVMLELGQPMHAFDADKLQGTVRVRYAKAGEQLVTLDEKNLELQQ
NTLLIADDKGPLALAGIMGGLASSVTDQTQRLFFECAHFTPAAIVGKARQYGLHTDSSHR
FERGVDPALPARALTRALNLLQSIAGGKVTEWVTAGQSASAQQPSIQLRRSRVTQLLGTE
IEDSFISQLLGRLGCQVTVGADGWLVTPPSYRFDLTIEVDLIEEIARVYGYNNLAINQAA
MPLNLKPLPESEQELHVLRMALIGRGYHEVISYSFVEESAVKQLSPEIPYVQVKNPISED
MSTMRTSLFPGLLGVLSYNQKRQQSRVRVFETGLIFSLEAGQMQQVPVIGGLIFGQVEPM
SWQGNSRKVDFYDLKGDVEALLAMSHLHDQVQFVPAQSPEFHPGQCAQIQYQEQTIGLIG
QLHPQWLKPFDVQGPVFMFQLFQDSLLTKQVPQVTGISKFPEVQRDLAFVVDKTCPVATL
LSAIKSLDNSLIKQIQVFDVYEGTGLTDSQKSVAISLKIQHNDRTLTDDEVDQLIQQVID
RAHTRVGASLR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttagtgaacaatggttaagaacttggtgtaatccaaactggacaacacaagag
ctatcggaagcgctgagtttagctgggctggaagtagatgatataacagcggttgcacca
gcctttagcggtgtggtagttgccgaagttgtgcgtgttgatgcgcatcccgatgctgaa
aagttgcgcgttgcccaagttaacgtgggtgaagaggctttggtacagattgtctgcggt
gcgcccaatgtgcgtccgggaattaaagtgccttgtgcgaaagttggtgcggtattgccc
gacagttttaaaattaaaaaagctaaattacgcggtgtggaatccttcggtatgctgtgt
tcagcaaccgagttaggcctagagcaagactacgatggtttgtgggagttgtcggccgat
ttaaccgttggtgaggatattcgccaagccttggctttagacgaccaattgattgaagtt
gaccttactcccaatcgtgccgattgcttgagtgttgaaggcttggctcgtgaattagcc
gtggtgagtgatgctccttttcaacaacctttcgagttgtcacctttaaccttgtctggc
aactgcccgcagtccgtagagattttagattcgcaggcctgcttgacctatttaggctgt
gtggttactgattataatgcccaggccagcacgccagattggatggttcagcgtttaatt
cgtagcggtttgcgtccaatctccttattggtggatattaccaactatgtgatgttggag
ctgggacagccgatgcatgcgtttgatgccgataagttgcaaggcactgtacgagtgcgc
tatgccaaggctggcgaacagttggtcaccttggacgaaaaaaatctagagttacagcaa
aacaccctattgattgccgatgataagggacccttagccttggccggtatcatgggcggc
ctagcatcttcagtaaccgatcaaactcagcgtttgttttttgaatgtgcccatttcact
cctgcggcgattgttggtaaagcgcgtcagtatggtttgcataccgattcgtcgcatcgt
tttgaacgcggcgttgacccggctttgccagctagagctttgacgcgtgccttaaaccta
ttgcaatcgattgccggtggcaaggtgaccgaatgggttacggcgggccaaagtgcatcc
gcccagcaaccgagcattcaactgcgtcgcagtcgcgtgacccaattattaggcaccgag
attgaggatagctttattagtcaattgttaggtcgcttaggctgtcaggttactgttggt
gcagacggctggctggtgacgcctccctcctatcgctttgatttaaccatcgaagtggac
ttgattgaagaaattgcacgtgtgtatggctataacaatctagcgattaaccaagcggca
atgccattgaacctgaagcccctacctgaaagtgagcaggagttgcatgtactgcgtatg
gcgttgattggtcgtggctaccatgaagtgattagttacagttttgttgaggaatcggcg
gttaagcagctaagcccagagattccgtatgtgcaagtcaaaaacccgatttcagaagat
atgagtaccatgcgtacctcgctcttcccaggtttattaggggtgttgagctacaaccaa
aaacgccagcaatcgcgtgtacgcgtatttgaaacgggtcttatcttctcgttagaagcc
gggcagatgcagcaggtaccagtgattggcggacttatttttggccaggttgaacccatg
agctggcaaggtaacagtcgcaaggtcgatttttatgacctaaaaggcgatgtcgaagct
ctgttagccatgagtcatttacatgaccaggtgcagtttgtgccggcacaaagccccgag
ttccatcctgggcagtgtgcgcagattcaataccaggaacaaacgattggcttaattggg
cagttgcatccgcaatggctcaagccttttgatgtgcagggaccggtatttatgtttcag
ttattccaagatagcttgttaaccaaacaggttccacaggtgacaggaatttctaaattc
cctgaagtacaacgtgatttggcgtttgtggttgataaaacctgtcccgttgcgaccctg
ctgtctgcgataaaatccctagataattcactgataaaacagatccaagtctttgatgta
tatgagggtaccggtttaacggattcgcaaaagagtgtagcaattagtttaaaaatccaa
cataatgatagaaccttgaccgatgatgaggttgatcagttgattcaacaagttatagac
cgtgcgcatacgcgtgtcggtgctagcttgcgataa
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