Thiomicrospira cyclica: Thicy_1443
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Entry
Thicy_1443 CDS
T01517
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thicy_1443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcy03400
]
Thicy_1443
Enzymes [BR:
tcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thicy_1443
DNA repair and recombination proteins [BR:
tcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thicy_1443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_11
AAA_22
AAA_19
PIF1
TrwB_AAD_bind
cobW
AAA_16
Zn_ribbon_6
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AEG32203
UniProt:
F6DA72
LinkDB
All DBs
Position
complement(1634291..1636525)
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AA seq
744 aa
AA seq
DB search
MTPSLRVQVALPGPFWQPLSYLLPDDVANQATVDLQAWSQGWLGWRVAVPFRNQTKIAVV
VGVNQDDGVDASKLKPLLHKLDDEPLFNAQDLAFLHWAASYYHEPLGEVVMAALPKRLRV
GKPLSLPGVVTWQRSVLGQTVSVDQLSARAHKQRALWQAFCDDQAWSSSQLNAAFSQWQP
LVKRWVEQGWLVVSEGACLAQKTLPASVRHSLNEEQAAAVAQVQASKGFRCFLLDGVTGS
GKTEVYLALIEQVLAQGKQVLVLVPEIGLTPQTAARFEAYLQQPVVALHSGLNDQERHCA
WQVMRRGEAQVMLGTRSALFTPFANLGLCILDEEHDLSFKQQDGFRYYARDLLIRRAQML
QIPVVLGSATPSMESLHNAQSGRFGYLRLSQRAANAQPPQLRLLDVRGDRLQEGLSNKAL
HQMREALAAGGQVLVFLNRRGFAPVLLCHSCGWQGSCSHCDANLTYHQASDSLKCHHCGF
QQPKPKACPACGATQFVALGQGTERLEQFLTQQFPTHSILRIDRDTTRLKGSLAEKVGQA
RDGAADILIGTQMLAKGHHFPKLTLVVMLDLDQGLFSVDFRGAERMAQLLVQVAGRAGRA
SQPGRVLIQTHQPEHPTYQQLLREGYAGFAADTLRDRQLANLPPFGFQLLVRVEAVDSNQ
AVAFLEAIKDLLLAVPVSQPCEVWGPVTAPMAKRQNRWRYQLLLQAETRGSLQAWWQAVA
ADVYAHPLANRIRWSIDVDPQETS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacgccctcgctccgtgttcaagtcgcacttcccggcccattttggcagccgttaagc
tatctgttgcccgacgatgttgctaatcaagccactgtcgacctccaggcctggtcgcag
ggttggcttggttggcgcgttgcggtgccttttcgtaatcagaccaaaatcgcggtggtg
gtaggggttaatcaagacgatggtgtcgatgcaagtaagctgaaacccttgttgcacaag
cttgatgacgagccactattcaacgcacaggatttggcctttttgcactgggcggccagc
tattatcatgaacccttaggtgaggtggtgatggcggctttgccgaaacgcttgcgggtg
ggcaaacccttatccttaccaggggtggtgacctggcagcgctcggtattaggccagacg
gtcagtgtcgatcaactcagtgcgcgggcgcacaaacaacgagctctgtggcaggccttt
tgcgatgaccaggcctggtcatccagtcaactgaatgcggcatttagtcaatggcaacct
ttagtgaagcgatgggttgagcagggctggttagtggtcagtgaaggtgcctgtttggcg
caaaaaactctgccggcatcggtgcgccactctttaaatgaagaacaggctgcggcggta
gcgcaggtgcaggcttcgaagggttttcgttgttttttgcttgacggtgttactggtagc
ggtaaaaccgaggtgtatttggctttaattgaacaggtgttggcgcagggtaaacaagtt
ttggtgttggtgccggaaatcggtttaaccccgcaaacagcggcccgctttgaggcctat
ttgcaacaaccggtggtggctttgcactcgggccttaatgatcaagagcgtcactgtgcc
tggcaggtgatgcgtcgcggtgaggctcaggtgatgctgggtacgcgctcggctttgttt
acgccttttgctaatttgggcttgtgcattttggatgaagaacatgatctgtcctttaaa
caacaagatggttttcgttattacgcacgggatttactcattcggcgcgcgcagatgttg
caaattccggtggtgctgggctcagcaacgcccagcatggaaagtttgcataatgcgcaa
tcggggcgctttggctatttgcgcctgagtcagcgagcggccaatgcgcaaccaccgcag
ttgcgtttgttagatgtgcgtggtgatcgtttgcaagaaggcttgtcgaacaaagccttg
caccagatgcgcgaagccttagccgccggtgggcaggtgttggtgtttttaaaccgtcgt
ggttttgcgcccgtgttgctatgccatagctgtggttggcaggggagttgttcgcactgt
gatgccaatttaacctatcatcaggctagcgatagcttaaagtgccaccattgcgggttt
caacagccaaaacctaaggcttgtccagcttgtggcgccacccaatttgtggctttgggg
cagggaaccgagcgtttagagcagtttttaacccagcaatttccaactcatagcattttg
cggattgaccgagataccacgcggttaaaaggcagtttggcggaaaaagtggggcaggcg
cgggatggcgctgccgacattttgattggcactcaaatgttggctaaaggtcatcatttt
cctaagctgaccttggtggtgatgctcgatttagatcagggcttgtttagtgtcgatttt
cgtggtgccgagcgcatggcgcaactgttggttcaggtggccggtcgcgcggggcgagcc
agtcaacctggacgagtcttgattcaaacccaccaacccgaacatccgacctatcaacaa
ttattgcgcgaaggttatgccggttttgccgcggataccttgcgcgatcgacaattagcg
aacctgccgccgtttgggtttcagttgttggtgcgagtagaggcggtcgattccaaccaa
gcggtcgcgtttttagaggcgattaaagacttattattggctgtgccggttagccagccc
tgcgaggtgtggggcccggtgactgcgccgatggcgaaacggcaaaaccgctggcgttat
caattgttattgcaagcagaaacccgaggcagtctgcaggcctggtggcaagcagttgcg
gcagacgtttatgcccatccgttggcgaaccggattcgttggagcattgatgtcgatccg
caagaaaccagttaa
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