Thiomicrospira cyclica: Thicy_1473
Help
Entry
Thicy_1473 CDS
T01517
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcy03009
]
Thicy_1473
Enzymes [BR:
tcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Thicy_1473
Ribosome biogenesis [BR:
tcy03009
]
Prokaryotic type
rRNA helicases
Thicy_1473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
FIST
AAA_22
RsdA_SigD_bd
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEG32233
UniProt:
F6DAH7
LinkDB
All DBs
Position
1702123..1703364
Genome browser
AA seq
413 aa
AA seq
DB search
MNFADFELDDRLLDALADVHFNRPTPIQQQAIPALMNGEDVLAGAATGTGKTAAFVLPVL
QHIIDNPQGYSPNPRALLLAPTRELALQIRQVVKSLSRHLDLRSVAITGGLAQDKQRALL
TQPYQILIATPGRLLNLIEQDAIDLSDLELVMIDEADRMLDMGQGPDVYALLDAIPDSFQ
AGLFSATLSGSGIERFAQRMLDDPTIIQVDAANHDSNQVQQLLYFADDREHKQTLLRTLL
QDASCEKALVFCNKKSRAIELNDWLNAEGLASDVLHGDFIQAARLERVKRFTDHPKQVLV
ATDVAARGLDIANITHVINFDVPLRGDIYIHRIGRTGRAQQVGLAITLAEGHELKDIARI
EYHLNKRLNVTTMPGLEARLSLNKPTRAKKKPHKKKLAKKLAKQPAKKSPKRR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccgattttgaacttgatgaccgcctacttgacgccttagctgacgtccat
tttaatcgccctacacccattcaacagcaggcgattcctgccttaatgaacggcgaagac
gtcctagctggcgccgcaacaggcacgggtaaaaccgctgcgtttgtgctcccggtactg
caacatattattgataatcctcagggttattcgcctaacccgcgtgcgctattactggct
ccaacgcgagagttagccttacaaattcgccaggtggttaaatcgctcagccgtcactta
gatcttcgctcggtcgcaattaccggtggccttgcccaagataaacaacgggccttatta
acccagccgtatcaaatcctgatcgccaccccaggccgcttactgaatctcattgaacaa
gatgccattgacctgtccgaccttgagctagttatgattgacgaggccgaccggatgctc
gacatgggtcaagggcccgatgtctatgcgttattggatgcgattccagatagttttcaa
gccggtttattttcagccaccctatcggggagtggcattgaacgctttgcacaacggatg
cttgatgatccaacaattattcaagttgatgcggccaatcacgactccaatcaagtgcaa
caactgttgtactttgcagacgatcgcgagcataaacagacgctattgcgaacgctacta
caagatgccagctgtgaaaaagcgttggttttttgtaataaaaaatcacgtgcgattgag
ctcaatgactggttaaatgcggaaggacttgcttcggatgtacttcatggtgattttatc
caagccgctcgcttagaacgggtaaagcgcttcactgaccaccccaaacaagtgttagtt
gccaccgatgtggcggcacgagggcttgatattgccaacataacccacgttattaatttt
gatgtccctttacgcggtgatatctatattcatcgaattggacgaaccggacgtgcacag
caggtcggcttggcgattaccctggccgaagggcatgaactcaaagacatcgcacggata
gagtatcacctgaataaacgtttgaatgtgacgaccatgcctggtttagaagcccggttg
agcttaaacaaacccacccgcgctaagaaaaagccgcacaaaaagaaattggctaaaaag
ctggctaaacaacccgctaaaaagagcccaaaacgccgctaa
DBGET
integrated database retrieval system
