Trachymyrmex cornetzi: 108757480
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Entry
108757480 CDS
T11212
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tcz Trachymyrmex cornetzi
Pathway
tcz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108757480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcz03021
]
108757480
Enzymes [BR:
tcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108757480
Transcription machinery [BR:
tcz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108757480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
FAM198
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
108757480
NCBI-ProteinID:
XP_018357409
LinkDB
All DBs
Position
Unknown
AA seq
2031 aa
AA seq
DB search
MLHLILVAAVVTLVAAKPTTEDTVDISKNHETTDDLLKSAHELLKRIDAEYAKWNNKQSI
TAWNYASNLTNENLAEKLKWSAEGANVTKHIIQIVNDFPWRNLKDESMRRQFKKLSILGV
AALPEQSYNEFEMTVSKMENIYSTAKICDYHNKSKYLALEPEIIEISKSSHDPEELKHIW
VEWRKASGEKVKSLYPKYVELANTVATLNNFSDYAAFWMKDYEADDFPEQIEIQWQQLKP
LYLQLHAYVRRELRKKYGEDIVSKDGPIPAHLLGNPWAQTWNIANFTVPFSGKQLPDVSV
ALVEQDYNATSMFRLAENFFISINLTAMPDTFWEKSILTKKDGVDMICHASAWDFYDGED
FRIKQCTRVNMEDLLTAYHEMGHIEYYLQYKNQPVVFKEGANPGFHEAVGDVISLSVSTP
SHLKKIGLLTDDSTDREAFLNHLYMKSLDKIVFLPFAYMMDRWRWNVFQGKVTPDNYNCN
WWTLAEEYQGIEPPVDRSEEDFDPGSKYHIIAGVEYIRYFVSFVIQFQFHKALCIEAKQY
DPSNPDAKPLSQCDIYNNKDAGNLLKSMLELGSSKPWQDAMEKISGQRQMDAAGLLEYFK
PLTDWLTEENKKTNEYIGWKPSKKLVFKSRSSMVKEQFRETNVASEVSHISFGVDSMHDI
SMQANVEMISKNLYNEDVKHTPALQGALDRRMGVSSTGVECETCNKKLNDCVGHFGYLNL
ELPVFHVGYFKSIIQILQTICKRCAHVLLTHGERKFFSRSIQNPKSGYLMRKALRRKILE
VARKKTVCPNCKSNNGPVKKAGFLKIVHEKYKNLKKIDPIIQEKLAELAPRMERDIEFKN
IVEQNYRCVFDQYLYPNVVQELFNRIPTGDICFLLMNPGCATPVDLILRRIPVPPICIRP
SILSDLKAGTNEDHLTMKLSEIAFINDVIRKQKGVTINMHIEQWDFLQLHCGLYINSEMS
GIPVHMQPQKFGRGIVQRLKGKQGRFRGNLSGKRVDFTSRTVISPDPNLRIEQVGVPIHV
AKTLTYPERVIPSNIELMRQLVRNGPDTHPGANYIQYKNSQNRRYLGYGDRNKAAQDLQY
GDIVERHLKDDDLVLFNRQPSLHKLSIMTHRTKVLEHRTFRFNECVCAPYNADFDGDEMN
LHLPQTEEARAEALVLLANKSNLVTPRNGDLLIAATQDFITGAYLLTQKDTFLQLEQARL
ALCLLAGSDASMNVTLPPPAIVKPARLWTGKQIFSLIIRPNRECPVKANLKARGKTYTNG
KEFCINDSYVIIRNSELLAGTMDKSVLGSGSKQNIFYILLRDWGEDVATAAMWRLTRITN
HFNFERGISLGIGDLIPSQGLLRAKERILNTHYSTCNEYIQLMEQGRLVCQPGCSEEETL
ETRILNELSVIRDDVGKACLRELHPTNTPLIMALCGSKGSFINISQMIACVGQQAINGCR
VPDGFENRALPHVLTRSKKPDAKGFVENSFYSGLMSKEFYFHAMGGREGLTDTAVKTAET
GYMQRRLIKSLEDLCIHYDMTVRNSMCDMIQTTYGGDGLDPTYMEGKDCPVDYERVYEHV
RAKMPYITEKPLDYVTVINATKEMLSAKEYECLSEEFKDELTSFLKLKVARKIAFYRQNV
ISNSPVTSQLERFTLSQLVEFIHTCKEKYMRAKIEPGTAVGALAAQSIGEPGTQMTLKTF
HFAGVAAMNITQGVPRIKEIINASPKISTPIITATLINDTNSEFAEQVKARIEKTTLGDV
SEYIEEIYLPDDHFLIIKLDIDRIRTLKLEVDVNSVCYKLCTSKLKLTSKNVEKMTDSVI
IIRPNRSKDKDSNFPFRQLTEAIPNVIIKGLPSINRVVVHNKNLGSKSKFTLFVEGDNFR
EVMATRGILGEKTKSNNTIEVFKTLGIEAARTTIMSEIKSVMENHGISIDCRHLMLLADL
MTSRGEVLGITRQGLAKMKESVLNLASFEKTADHLFDAAYYGQKDVISGVSESIIMGIPV
PLGTGIFKLLHRADKDEPCKKELLFDDPQFHKPLHSGRRLPRIQPRPLLQT
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctaatcttggtagcagcagttgtaactctagtggcagccaaaccaacgacc
gaagacacagtagatatcagcaaaaatcacgaaactaccgacgatcttctgaaaagcgct
cacgaactcttgaaacgaatcgacgcagagtatgcaaaatggaataataaacagagtatc
accgcatggaattacgcatcgaatctaacgaatgagaatctggcagaaaagttaaaatgg
tcggcagagggggcaaacgttaccaaacatattattcaaatagtgaatgacttcccttgg
agaaacttgaaagatgagtctatgaggagacagttcaaaaagctcagtatactcggtgtc
gccgctctccctgaacaaagttataacgaatttgagatgacggtgagtaaaatggaaaac
atctatagcaccgcaaagatctgcgattatcataacaagagcaagtaccttgcacttgag
ccagaaattattgagatatcaaagagtagtcacgatcctgaggaactgaagcatatctgg
gtggagtggaggaaagcatcaggcgagaaagtcaagtctctgtaccccaaatatgttgag
ctagccaacaccgtggcgacactcaacaacttctctgactatgcagcattttggatgaag
gattacgaggctgatgatttccctgaacaaatcgagattcaatggcaacaactgaagcca
ctgtatttacaactgcatgcttacgtacggcgcgagctcaggaagaaatacggcgaagac
atcgtctccaaggacggcccgatcccagcgcatctattgggcaatccctgggctcagact
tggaatattgcaaacttcaccgtaccgttctcaggcaaacaactgccggatgttagtgtt
gctttggtagaacaagattacaatgctacaagcatgttccgcctcgctgagaacttcttc
atatcaattaacttgactgccatgccggacacattctgggaaaaatcgattctaacaaag
aaggatggtgtagacatgatctgccatgcgagcgcatgggacttctacgatggcgaagac
ttcaggatcaagcaatgtacgcgcgttaacatggaagatttactaacagcgtatcatgag
atgggtcacatcgagtattacttgcagtacaagaaccagcctgtagttttcaaggagggc
gcgaatccaggtttccacgaggcggttggtgatgttatttctctcagcgtatctaccccc
agtcatctcaagaagatcggtctactgacggatgactcgactgatcgggaggcattcctc
aatcacctctatatgaagagtcttgacaagattgtcttcctgccattcgcttacatgatg
gaccgatggcgttggaatgtattccaaggaaaagtcacgccagataattataactgcaac
tggtggacactcgccgaggaataccagggcatcgaacctcccgtagatagatcggaagaa
gacttcgatcctggctcaaaatatcatataattgcgggcgtcgagtatataagatacttt
gtaagctttgtaatacagttccagttccacaaggcattgtgcatcgaggcgaagcaatat
gatccgagcaatccagatgccaaaccgttgagtcaatgtgatatttacaataataaggac
gctggaaatctgctaaaatctatgctggagttgggttcttcgaaaccgtggcaagacgcg
atggagaaaatctctggtcaaaggcaaatggatgcagctggactcttggaatattttaag
cctttgactgattggctgaccgaagaaaataaaaaaactaatgaatacattggatggaaa
cccagtaaaaaacttgtatttaaatcaagatcaagcatggtgaaagaacagttcagggag
acaaatgtcgccagcgaagtctcccatatatcctttggagtggacagcatgcacgacata
agtatgcaggccaatgtggagatgatctccaaaaacctgtacaatgaagatgtgaagcat
actcctgctttgcaaggagcattggacaggcgcatgggagtgagttctacaggagtcgaa
tgcgaaacgtgtaataaaaagttgaatgactgcgtaggacatttcgggtatcttaattta
gaattaccagtctttcatgttggttacttcaaatctatcattcagattttacagacaatt
tgtaagagatgtgctcatgttttgctaacgcacggagaaaggaaatttttttcgcgcagt
atacaaaatccgaaatcgggatatttaatgcgcaaagcattgcgtaggaaaatattggaa
gtagcgagaaagaagacggtatgtccaaattgtaaatcaaataatggccctgtgaagaag
gctggttttctcaagattgtacatgagaaatacaagaacttaaagaaaatagatcctatt
attcaagaaaagttggctgaattggccccaaggatggaacgcgacatagagtttaaaaat
atagtagaacaaaactacagatgtgtatttgatcaatatctatatcctaatgtggtgcaa
gaacttttcaatagaattccaacgggcgatatctgcttcttgttaatgaatcctggatgt
gcaaccccagtagatttgatattgagaaggatccctgtgccaccaatttgtattagacct
agtattttatctgacctaaaagctggtacaaatgaagatcatctgacaatgaaattgtca
gaaatagcttttatcaatgacgtcattcggaagcaaaaaggtgtcactataaatatgcac
atagaacaatgggattttcttcaactgcattgtggtctttacattaatagtgaaatgtcc
ggaatacctgtacacatgcaacctcaaaagtttggtagaggtatagtgcaaagattgaaa
ggaaaacaaggtcgtttccgaggtaatttgtctggtaaacgtgttgattttacttctcgc
acagttatttcgcctgatccaaatctcagaatagaacaagttggagtacctatacatgtt
gcaaagactttaacgtatcctgaaagggtcattccatcaaacatagaattaatgcgacaa
ttagtaagaaatggtccagatacacatcctggagcaaactacatacaatataagaactca
caaaacaggcgataccttggatatggtgatcggaataaagccgcccaagacttacagtat
ggcgacattgttgagaggcatctcaaagacgatgacttagtgctgttcaatcggcaacca
tctttgcacaaattaagtattatgacacatagaaccaaggtattggagcatcgaacattc
agattcaacgaatgtgtctgtgcaccttacaatgcagattttgacggcgacgagatgaat
cttcacttaccgcagactgaagaagccagagccgaggcgttagttttattagcgaataaa
tctaatctagttacacctcgcaatggcgacttattgatagcagcaactcaagattttatc
accggtgcttatctcttaactcaaaaggatacatttctccagctagaacaagctagatta
gctctttgccttttagctggctcggatgcttctatgaacgtaactcttcctccgcctgca
atcgtaaagccggcgagattgtggaccggcaaacaaatattcagtctcattatacgaccg
aatagggaatgccctgtcaaagcaaatctaaaggcaaggggcaagacatataccaacgga
aaagaattttgtattaatgactcttatgttattattcgcaattccgagcttctagcagga
acaatggataaatctgtattaggctcaggatcaaaacaaaatatattttacattctgctg
cgtgattggggtgaagatgttgcaaccgcagctatgtggcgtttaaccagaataacaaat
cacttcaattttgagagaggaatttctcttggtatcggtgatcttatacctagtcaaggc
cttcttcgagccaaggaaagaatattaaacactcattactctacatgtaacgaatacatt
cagttaatggaacagggtcgtcttgtctgtcagcctggatgttcagaagaggaaacactg
gaaacgagaatattaaatgaactttcagtgatccgtgacgacgttggtaaagcgtgtttg
agagaactgcatcctactaacacacctctaattatggcactctgtgggagtaaaggtagt
ttcatcaacatttctcaaatgatcgcttgcgtaggtcagcaagctatcaacggatgtaga
gtgccggatggatttgagaatcgtgcgttacctcatgtcttgacacgatcaaaaaagccg
gatgctaaaggctttgtggaaaattcattttattctggattaatgtccaaggaattctac
tttcatgcgatgggcggtcgagagggtctcacagataccgctgtaaaaactgcggagact
ggatacatgcagagacgattaattaaaagtttagaagatttgtgtatccattacgacatg
acagtacgcaactctatgtgtgatatgatacagactacgtatggcggtgatggattggac
cctacgtacatggagggtaaagactgtcccgtggattatgaaagagtgtacgagcatgtg
agggcgaaaatgccttatattaccgaaaagcctttagattacgttaccgtaattaatgcc
acaaaggaaatgctaagcgctaaggaatatgagtgccttagtgaggaattcaaagacgaa
ttgacttcgttcttgaaattgaaagtggcgcgaaaaatagcgttttatcggcagaacgtt
atatcgaattcgccagtgacttcgcaacttgaacgtttcaccctctcacaattagtagag
tttattcacacgtgcaaagagaagtacatgagagctaagatagaaccgggcactgctgta
ggtgcgcttgccgctcaaagtatcggtgagccagggactcagatgacactcaaaacattc
cattttgccggtgtagctgctatgaacattactcaaggagtaccccgtattaaagaaatt
attaacgcgagtcccaagatcagtactcctatcataacagcgacattgatcaatgataca
aattccgagtttgccgagcaagtgaaggcaagaattgagaagacgaccctgggagatgta
tctgaatatatcgaagaaatatatttacctgatgatcatttccttataataaaattagat
atcgataggattagaacgttgaaattagaagttgatgttaattccgtatgctataaactc
tgcacttcaaaattgaaattaacttcaaagaatgtagaaaagatgaccgactcagttatt
attattcgaccaaatcgaagtaaagataaagactcaaattttccatttcgtcaattgaca
gaggccattccaaatgttataataaagggtttaccatcgatcaatagagtagttgtacat
aataaaaatctcggtagtaaatcgaaatttacattatttgtcgaaggagataattttaga
gaagttatggcaacacgtggcatcctcggtgagaagacaaagtcgaataatacaatagaa
gttttcaaaacgctcgggatagaagcagcaagaacgactatcatgtcagaaattaagtcg
gtaatggaaaatcacggtatcagtattgattgtcgacatttaatgctcttggcagattta
atgactagtagaggagaagtactcggtatcacgagacaaggtttggcaaaaatgaaagaa
tcggttttaaacttggcatcgtttgagaaaactgcagatcatctatttgatgcagcttat
tatggacaaaaagacgttataagcggcgtatcggaatcaattataatgggcattccagtt
ccactaggcacaggaatcttcaagctgttacacagggcagacaaagacgaaccatgcaaa
aaggaacttttatttgatgatccacaatttcacaaaccattgcattctggaagacgactt
ccacgaatacaaccgcgtccactattgcaaacctaa
DBGET
integrated database retrieval system
