Trachymyrmex cornetzi: 108757651
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Entry
108757651 CDS
T11212
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tcz Trachymyrmex cornetzi
Brite
KEGG Orthology (KO) [BR:
tcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcz03009
]
108757651
Enzymes [BR:
tcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108757651
Ribosome biogenesis [BR:
tcz03009
]
Eukaryotic type
90S particles
Helicases
108757651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
NACHT
HEM4
Motif
Other DBs
NCBI-GeneID:
108757651
NCBI-ProteinID:
XP_018357637
UniProt:
A0A195EHD4
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MDAHDLFKKLAVGAKFDIKRFRKDAERFQIVKPSKNEIEINNIVEEIKDEVLEPTESKAK
RKYKDETEDVDEITLLNGLSVPKDGSVPVIKRKKVATADKMLKLEQEKINHLRNMNRISV
TGSHVPKLILEFNELKTNYQVSENLLNNMKNSGYLYPTPIQMQAMPIMLEGRQILACAPT
GSGKTAAFLLPIIHSLRGPQKKGFRAVILNPTRELAKQTYRECLKLSDGCDFRIHIISKI
NQALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGF
REQLEEITKACVSTSLRRSMFSATNTPAVSKWCRRNMKGLVTVTVGQRNAAADLVDQKLL
FVGNERGKLVEFRNIIQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTMTQR
DNTVRCFREGKIWVLICTELMGRGIDFKGVNLVINYDFPPSAISYIHRIGRTGRAGHKGK
AITFFTQQDTVNLRSIAAVLRASGCDVPDYMLTMKKHGKKERRKLERTAPTREKILTVPT
YKRRKRKSCVEKKSESEKEK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatcttttcaaaaagcttgcagtcggtgctaaatttgatataaaacgc
tttcgaaaagatgcagaaagatttcagattgtaaaaccaagtaaaaatgaaatcgaaata
aacaatatagttgaggaaataaaagacgaagtattagagcctacagaaagcaaagcaaaa
agaaaatataaagatgagaccgaagatgttgatgaaataacattgctgaatggactatcg
gtaccgaaagatggaagtgttccggttataaaacgtaaaaaagtcgcaactgctgacaag
atgttaaaactggaacaagagaagataaaccatctaagaaacatgaatcgtatttcagtc
acaggcagtcatgtacctaaattaatattagaatttaatgaattaaaaacaaattaccaa
gtgtcagaaaatttgttaaataatatgaaaaacagtggatacttgtatccaacaccaata
cagatgcaagcaatgccaattatgttagagggcagacagatactggcttgtgctccaaca
ggatcagggaaaactgcagcatttttgttaccaatcattcatagtttacgaggaccacaa
aaaaagggctttcgcgctgttattctaaatcctacaagggagttagccaaacagacttat
agggaatgtttgaaattgagtgacggctgtgactttagaattcatataattagtaaaata
aatcaagctcttaccaaatatggtccttcaagctcgcaaaaatttgatattttaattact
acaccaaaacgattagtatttctcttaaatcaagatcctccagccatttcattaaataat
gttgaatggttaattgtggacgaagctgataaactgttcgaggaaggaatacggggtttt
agggagcaattagaagagattacaaaagcctgtgttagtacaagtttacgtcgtagtatg
ttcagtgcgacaaatactccagcagtgtcaaagtggtgccgtcgtaacatgaagggtctt
gtaacagtaacagttggacaaagaaatgcagctgcagatttggtagatcaaaagcttctt
tttgttggaaacgaaagaggtaaattagtggaatttagaaatattattcagaagggtata
tcgccaccggtcttagtatttgtacaaagcaaagagagggctcaagaactctttaatgag
cttatatacgatggaattaatgtggatgttattcacgctgacagaacaatgacacagcga
gacaatactgtgcgttgctttagagaaggaaagatttgggttttgatctgcacagaatta
atgggcagaggtatagattttaaaggcgtaaatctcgttataaattatgattttcccccg
tccgccatctcttacattcacagaataggtcgtactggtcgcgccggtcacaagggaaag
gcaataacgtttttcactcaacaagatacggtgaatttacggagtattgcagcggttttg
cgggcctccggatgcgacgtaccagattacatgttaaccatgaaaaagcacggtaagaag
gaacgacgtaagctcgagcgtacagcacccacacgtgaaaaaatattaaccgtgcctacg
tataaacgacgtaaacggaagtcatgcgtcgaaaagaaatcggagtcggagaaggaaaag
taa
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